Microbacterium phage HollowPurple
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Detailed Information for Phage HollowPurple
Discovery Information
Isolation HostMicrobacterium foliorum NRRL B-24224
Duplicates of this PhageSkolai
Found ByAustin Pepin
Year Found2024
Location FoundPocatello, ID United States
Finding InstitutionIdaho State University
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?Yes
Isolation Temperature30°C
GPS Coordinates42.0 N, 112.0 W Map
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedJan 8, 2025
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina
Sequencer UsedIllumina NextSeq 1000
Read TypeSingle-end reads
Read Length100 bp
Approximate Shotgun Coverage4680
Genome length (bp)63870
Character of genome endsDirect Terminal Repeat
Direct Terminal Repeat Length3797 bp
GC Content61.7%
Fasta file available?Yes: Download fasta file
Characterization
ClusterED
SubclusterED2
Cluster Life CycleLytic
Other Cluster Members
Annotating InstitutionIdaho State University
Annotation StatusIn GenBank
MorphotypePodoviridae
Number of Genes122
Number of tRNAs4
Number of tmRNAs0
Has been Phamerated?Yes
Gene List

Click to View

HollowPurple_1

HollowPurple_2

HollowPurple_3

HollowPurple_4

HollowPurple_5

HollowPurple_6

HollowPurple_7

HollowPurple_8

HollowPurple_9

HollowPurple_10

HollowPurple_11

HollowPurple_12

HollowPurple_13

HollowPurple_14

HollowPurple_15

HollowPurple_16

HollowPurple_17
(ribosomal protein, uL24)

HollowPurple_18

HollowPurple_19

HollowPurple_20

HollowPurple_21

HollowPurple_22

HollowPurple_23

HollowPurple_24

HollowPurple_25

HollowPurple_26

HollowPurple_27

HollowPurple_28 — tRNA
(tRNA-Asn(gtt))

HollowPurple_29 — tRNA
(tRNA-Gly(tcc))

HollowPurple_30 — tRNA
(tRNA-Tyr(gta))

HollowPurple_31

HollowPurple_32

HollowPurple_33

HollowPurple_34

HollowPurple_35
(cyclic oligonucleotide sequestering protein)

HollowPurple_36
(NrdH-like glutaredoxin)

HollowPurple_37
(Phosphoesterase)

HollowPurple_38
(HNH endonuclease)

HollowPurple_39

HollowPurple_40
(terminase)

HollowPurple_41
(portal protein)

HollowPurple_42
(capsid maturation protease)

HollowPurple_43

HollowPurple_44
(major capsid protein)

HollowPurple_45

HollowPurple_46

HollowPurple_47

HollowPurple_48
(glycoside hydrolase)

HollowPurple_49
(head-to-tail stopper)

HollowPurple_50

HollowPurple_51
(tail terminator)

HollowPurple_52

HollowPurple_53
(major tail protein)

HollowPurple_54

HollowPurple_55
(tail assembly chaperone)

HollowPurple_56
(tail assembly chaperone)

HollowPurple_57
(tape measure protein)

HollowPurple_58
(minor tail protein)

HollowPurple_59
(minor tail protein)

HollowPurple_60

HollowPurple_61

HollowPurple_62

HollowPurple_63
(endolysin)

HollowPurple_64
(tail needle protein)

HollowPurple_65

HollowPurple_66
(RuvC-like resolvase)

HollowPurple_67

HollowPurple_68

HollowPurple_69

HollowPurple_70

HollowPurple_71
(DNA primase/polymerase)

HollowPurple_72 — tRNA
(tRNA-Ile(aat))

HollowPurple_73

HollowPurple_74

HollowPurple_75
(exonuclease)

HollowPurple_76
(ERF family DNA pairing protein)

HollowPurple_77

HollowPurple_78
(exonuclease)

HollowPurple_79

HollowPurple_80

HollowPurple_81
(RNA ligase)

HollowPurple_82
(polynucleotide kinase)

HollowPurple_83
(oxidoreductase)

HollowPurple_84

HollowPurple_85
(DNA helicase)

HollowPurple_86

HollowPurple_87

HollowPurple_88

HollowPurple_89

HollowPurple_90

HollowPurple_91

HollowPurple_92

HollowPurple_93

HollowPurple_94

HollowPurple_95

HollowPurple_96

HollowPurple_97

HollowPurple_98

HollowPurple_99

HollowPurple_100

HollowPurple_101

HollowPurple_102

HollowPurple_103

HollowPurple_104

HollowPurple_105

HollowPurple_106

HollowPurple_107

HollowPurple_108

HollowPurple_109

HollowPurple_110

HollowPurple_111

HollowPurple_112

HollowPurple_113

HollowPurple_114

HollowPurple_115

HollowPurple_116

HollowPurple_117

HollowPurple_118

HollowPurple_119

HollowPurple_120

HollowPurple_121

HollowPurple_122

HollowPurple_123

HollowPurple_124

HollowPurple_125

HollowPurple_126

Submitted Annotation in DNA Master FormatDownload
Submitted Minimal DNA Master FileDownload
Author ListDownload
Annotation Cover SheetDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionPV915866
Refseq NumberNone yet
Archiving Info
Archiving status Archived
SEA Lysate Titer 4x10^10
Pitt Freezer Box# 197
Pitt Freezer Box Grid# G7
Available Files
EM PictureDownload
GenBank File for PhameratorDownload