Gordonia phage Kuwabara
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Detailed Information for Phage Kuwabara
Discovery Information
Isolation HostGordonia terrae CAG3
Found ByMarchael Tom-Johnson
Year Found2018
Location FoundGreensboro, NC USA
Finding InstitutionNorth Carolina A&T State University
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?Yes
Isolation Temperature30°C
GPS Coordinates36.079268 N, 79.772055 W Map
Discovery NotesI discovered my soil sample on campus at A&T near their garden. I chose it because the plants were kinda wilted and wanted to know
Naming NotesI got it because the color of the bacteria lawn that grew was predominantly orange, so I named my phage Kuwabara due to the anime characters orange hair resemblence
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedDec 10, 2018
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina
Approximate Shotgun Coverage1086
Genome length (bp)54102
Character of genome ends3' Sticky Overhang
Overhang Length10 bases
Overhang SequenceCGTTAGGCAT
GC Content63.3%
Fasta file available?Yes: Download fasta file
Characterization
ClusterDN
SubclusterDN4
Cluster Life CycleTemperate
Other Cluster Members
Annotating InstitutionUniversity of Maine, Honors College
Annotation StatusIn GenBank
Number of Genes94
Number of tRNAs0
Number of tmRNAs0
Has been Phamerated?Yes
Gene List

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Kuwabara_1
(terminase small subunit)

Kuwabara_2
(terminase large subunit)

Kuwabara_3
(portal protein)

Kuwabara_4
(MuF-like minor capsid protein)

Kuwabara_5

Kuwabara_6
(LamD-like capsid decoration protein)

Kuwabara_7
(major capsid protein)

Kuwabara_8

Kuwabara_9
(head-to-tail adaptor)

Kuwabara_10
(head-to-tail stopper)

Kuwabara_11

Kuwabara_12
(tail terminator)

Kuwabara_13
(major tail protein)

Kuwabara_14
(tail assembly chaperone)

Kuwabara_15
(tail assembly chaperone)

Kuwabara_16

Kuwabara_17
(tape measure protein)

Kuwabara_18
(minor tail protein)

Kuwabara_19
(minor tail protein)

Kuwabara_20

Kuwabara_21
(lysin A, L-Ala-D-Glu peptidase domain)

Kuwabara_22
(lysin A, glycosyl hydrolase domain)

Kuwabara_23
(holin)

Kuwabara_24

Kuwabara_25

Kuwabara_26

Kuwabara_27
(lysin B)

Kuwabara_28

Kuwabara_29

Kuwabara_30

Kuwabara_31

Kuwabara_32

Kuwabara_33
(minor tail protein)

Kuwabara_34
(acetyltransferase)

Kuwabara_35

Kuwabara_36

Kuwabara_37

Kuwabara_38

Kuwabara_39

Kuwabara_40

Kuwabara_41

Kuwabara_42

Kuwabara_43

Kuwabara_44

Kuwabara_45

Kuwabara_46
(tyrosine integrase)

Kuwabara_47
(helix-turn-helix DNA binding protein)

Kuwabara_48

Kuwabara_49
(immunity repressor)

Kuwabara_50
(Cro protein)

Kuwabara_51

Kuwabara_52
(antirepressor)

Kuwabara_53

Kuwabara_54

Kuwabara_55
(ParB-like nuclease domain protein)

Kuwabara_56

Kuwabara_57

Kuwabara_58

Kuwabara_59
(excise)

Kuwabara_60

Kuwabara_61
(ribbon-helix-helix DNA binding protein)

Kuwabara_62

Kuwabara_63

Kuwabara_64

Kuwabara_65

Kuwabara_66

Kuwabara_67

Kuwabara_68
(HNH endonuclease)

Kuwabara_69

Kuwabara_70
(WhiB family transcription factor)

Kuwabara_71

Kuwabara_72
(HNH endonuclease)

Kuwabara_73

Kuwabara_74

Kuwabara_75

Kuwabara_76

Kuwabara_77

Kuwabara_78

Kuwabara_79

Kuwabara_80

Kuwabara_81

Kuwabara_82
(DNA methylase)

Kuwabara_83

Kuwabara_84

Kuwabara_85

Kuwabara_86
(RusA-like resolvase)

Kuwabara_87

Kuwabara_88

Kuwabara_89

Kuwabara_90

Kuwabara_91

Kuwabara_92

Kuwabara_93

Kuwabara_94
(HNH endonuclease)

Submitted Minimal DNA Master FileDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionMN892485
Refseq NumberNone yet
Archiving Info
Archiving status Archived
Pitt Freezer Box# 78
Pitt Freezer Box Grid# F11
Available Files
GenBank File for PhameratorDownload