Streptomyces phage NootNoot
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Detailed Information for Phage NootNoot
Discovery Information
Isolation HostStreptomyces griseus ATCC 10137
Found BySandra Meridew
Year Found2016
Location FoundKeller, TX USA
Finding InstitutionUniversity of North Texas
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?Yes
Isolation Temperature19°C
GPS Coordinates32.951878 N, 97.287514 W Map
Discovery NotesThe soil sample was found from the park across the street from Timber Creek High School. It was found at 19 degrees Celsius on September 11, 2016 at 10:32PM. The sample was muddy and clumpy and had small pieces of grass stuck in it. But it was moist making it easy to get out of the ground. It was collected 2-3 centimeters deep and was a dark brown with light brown patches.
Naming NotesThe name NootNoot comes from an inside joke/saying shared between me and some friends.
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedJan 30, 2017
Sequencing FacilityUniversity of North Texas
Shotgun Sequencing MethodIllumina Sequencing
Approximate Shotgun Coverage185
Genome length (bp)131086
Character of genome endsDirect Terminal Repeat
Direct Terminal Repeat Length10787 bp
GC Content50.2%
Fasta file available?Yes: Download fasta file
Characterization
ClusterBE
SubclusterBE1
Cluster Life CycleLytic
Other Cluster Members
Annotating InstitutionUnknown or unassigned
Annotation StatusIn GenBank
Plaque NotesThe concentration is 58.9. The average plaque diameter is 1 millimeter making the average area about .785 millimeters squared.
MorphotypeSiphoviridae
Number of Genes221
Number of tRNAs45
Number of tmRNAs1
Has been Phamerated?Yes
Gene List

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NootNoot_1

NootNoot_2

NootNoot_3

NootNoot_4

NootNoot_5

NootNoot_6

NootNoot_7
(Lsr2-like DNA bridging protein)

NootNoot_8

NootNoot_9

NootNoot_10
(ParB-like nuclease domain protein)

NootNoot_11

NootNoot_12

NootNoot_13

NootNoot_14

NootNoot_15

NootNoot_16

NootNoot_17

NootNoot_18

NootNoot_19

NootNoot_20

NootNoot_21

NootNoot_22
(HNH endonuclease)

NootNoot_23

NootNoot_24
(ThyX-like thymidylate synthase)

NootNoot_25

NootNoot_26

NootNoot_27

NootNoot_28

NootNoot_29

NootNoot_30

NootNoot_31

NootNoot_32 — tRNA
(tRNA-Thr (cgt))

NootNoot_33
(HNH endonuclease)

NootNoot_34
(endolysin)

NootNoot_35

NootNoot_36

NootNoot_37
(glycosyltransferase)

NootNoot_38
(ribonucleotide reductase)

NootNoot_39
(HNH endonuclease)

NootNoot_40
(LysM-like peptidoglycan-binding protein)

NootNoot_41

NootNoot_42

NootNoot_43
(portal protein)

NootNoot_44

NootNoot_45
(capsid maturation protease)

NootNoot_46
(major capsid protein)

NootNoot_47

NootNoot_48

NootNoot_49

NootNoot_50

NootNoot_51

NootNoot_52

NootNoot_53

NootNoot_54

NootNoot_55
(tape measure protein)

NootNoot_56

NootNoot_57
(minor tail protein)

NootNoot_58

NootNoot_59
(minor tail protein)

NootNoot_60
(minor tail protein)

NootNoot_61

NootNoot_62

NootNoot_63

NootNoot_64
(HNH endonuclease)

NootNoot_65
(metallophosphoesterase)

NootNoot_66

NootNoot_67

NootNoot_68

NootNoot_69

NootNoot_70

NootNoot_71

NootNoot_72
(DNA helicase)

NootNoot_73
(DNA primase)

NootNoot_74

NootNoot_75
(DnaE-like DNA polymerase III alpha)

NootNoot_76

NootNoot_77
(MazG-like nucleotide pyrophosphohydrolase)

NootNoot_78
(RecA-like DNA recombinase)

NootNoot_79

NootNoot_80
(holliday junction resolvase)

NootNoot_81

NootNoot_82

NootNoot_83
(Cas4 family exonuclease)

NootNoot_84

NootNoot_85
(RuvC-like resolvase)

NootNoot_86
(DprA-like ssDNA binding protein)

NootNoot_87

NootNoot_88
(methyltransferase)

NootNoot_89
(thymidylate kinase)

NootNoot_90

NootNoot_91

NootNoot_92
(terminase)

NootNoot_93
(HNH endonuclease)

NootNoot_94

NootNoot_95

NootNoot_96 — tRNA
(tRNA-Gly (tcc))

NootNoot_97 — tRNA
(tRNA-Gln (ctg))

NootNoot_98 — tRNA
(tRNA-Trp (cca))

NootNoot_99

NootNoot_100

NootNoot_101 — tRNA
(tRNA-Pro (tgg))

NootNoot_102 — tRNA
(tRNA-Thr (tgg))

NootNoot_103
(nucleotidyltransferase)

NootNoot_104
(FtsK-like DNA translocase)

NootNoot_105

NootNoot_106 — tRNA
(tRNA-Ile (tat))

NootNoot_107

NootNoot_108

NootNoot_109 — tRNA
(tRNA-Ser (gga))

NootNoot_110

NootNoot_111 — tRNA
(tRNA-Ser (tga))

NootNoot_112

NootNoot_113

NootNoot_114

NootNoot_115 — tRNA
(tRNA-Asp (gtc))

NootNoot_116

NootNoot_117

NootNoot_118 — tRNA
(tRNA-Asp (gtc))

NootNoot_119

NootNoot_120

NootNoot_121
(Ro-like RNA binding protein)

NootNoot_122

NootNoot_123

NootNoot_124

NootNoot_125

NootNoot_126

NootNoot_127

NootNoot_128

NootNoot_129 — tRNA
(tRNA-Glu (ctc))

NootNoot_130

NootNoot_131 — tRNA
(tRNA-Glu (ttc))

NootNoot_132

NootNoot_133 — tRNA
(tRNA-Val (tac))

NootNoot_134 — tRNA
(tRNA-Leu (tag))

NootNoot_135 — tRNA
(tRNA-Leu (tag))

NootNoot_136 — tRNA
(tRNA-Gly (gcc))

NootNoot_137 — tRNA
(tRNA-Arg (tct))

NootNoot_138

NootNoot_139

NootNoot_140

NootNoot_141 — tRNA
(tRNA-Ala (tgc))

NootNoot_142 — tRNA
(tRNA-Lys (ctt))

NootNoot_143

NootNoot_144

NootNoot_145 — tRNA
(tRNA-Asn (gtt))

NootNoot_146

NootNoot_147

NootNoot_148 — tRNA
(tRNA-Asn (gtt))

NootNoot_149
(band-7-like membrane protein)

NootNoot_150

NootNoot_151

NootNoot_152 — tRNA
(tRNA-Arg (cct))

NootNoot_153 — tRNA
(tRNA-Ile (gat))

NootNoot_154 — tRNA
(tRNA-Ala (ggc))

NootNoot_155 — tRNA
(tRNA-Lys (ctt))

NootNoot_156 — tRNA
(tRNA-Lys (ttt))

NootNoot_157 — tRNA
(tRNA-Arg (tcg))

NootNoot_158

NootNoot_159 — tRNA
(tRNA-Met (cat))

NootNoot_160 — tRNA
(tRNA-Met (cat))

NootNoot_161

NootNoot_162

NootNoot_163

NootNoot_164 — tRNA
(tRNA-Tyr (gta))

NootNoot_165 — tRNA
(tRNA-Tyr (gta))

NootNoot_166 — tRNA
(tRNA-His (gtg))

NootNoot_167 — tRNA
(tRNA-His (gtg))

NootNoot_168 — tRNA
(tRNA-Phe (gaa))

NootNoot_169

NootNoot_170

NootNoot_171 — tRNA
(tRNA-Cys (gca))

NootNoot_172 — tRNA
(tRNA-Thr (tgt))

NootNoot_173 — tRNA
(tRNA-Thr (ggt))

NootNoot_174

NootNoot_175 — tRNA
(tRNA-Arg (acg))

NootNoot_176

NootNoot_177
(DnaQ-like DNA polymerase III subunit)

NootNoot_178 — tmRNA
(tmRNA)

NootNoot_179
(hydrolase)

NootNoot_180

NootNoot_181

NootNoot_182

NootNoot_183

NootNoot_184 — tRNA
(tRNA-Ala (ggc))

NootNoot_185

NootNoot_186

NootNoot_187

NootNoot_188

NootNoot_189
(RNA ligase)

NootNoot_190

NootNoot_191

NootNoot_192

NootNoot_193
(polynucleotide kinase)

NootNoot_194

NootNoot_195

NootNoot_196 — tRNA
(tRNA-Leu (gag))

NootNoot_197

NootNoot_198

NootNoot_199 — tRNA
(tRNA-Val (gac))

NootNoot_200

NootNoot_201

NootNoot_202 — tRNA
(tRNA-Leu (caa))

NootNoot_203

NootNoot_204 — tRNA
(tRNA-Ser (gct))

NootNoot_205

NootNoot_206

NootNoot_207

NootNoot_208

NootNoot_209

NootNoot_210

NootNoot_211

NootNoot_212

NootNoot_213

NootNoot_214
(deoxycytidylate deaminase)

NootNoot_215

NootNoot_216
(rIIB-like protein)

NootNoot_217
(phosphoesterase)

NootNoot_218

NootNoot_219

NootNoot_220
(WhiB family transcription factor)

NootNoot_221

NootNoot_222

NootNoot_223

NootNoot_224

NootNoot_225

NootNoot_226

NootNoot_227

NootNoot_228

NootNoot_229 — tRNA
(tRNA-Gln (ttg))

NootNoot_230

NootNoot_231

NootNoot_232

NootNoot_233

NootNoot_234

NootNoot_235

NootNoot_236
(thioredoxin)

NootNoot_237

NootNoot_238

NootNoot_239

NootNoot_240

NootNoot_241

NootNoot_242

NootNoot_243

NootNoot_244

NootNoot_245

NootNoot_246

NootNoot_247

NootNoot_248

NootNoot_249

NootNoot_250

NootNoot_251

NootNoot_252
(Lsr2-like DNA bridging protein)

NootNoot_253

NootNoot_254

NootNoot_255
(ParB-like nuclease domain protein)

NootNoot_256

NootNoot_257

NootNoot_258

NootNoot_259

NootNoot_260

NootNoot_261

NootNoot_262

NootNoot_263

NootNoot_264

NootNoot_265

NootNoot_266

NootNoot_267
(HNH endonuclease)

Submitted Minimal DNA Master FileDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionMF347636
Refseq NumberNone yet
Archiving Info
Archiving status Archived
SEA Lysate Titer 6x10^9 pfu/mL
Pitt Freezer Box# 36
Pitt Freezer Box Grid# G2
Available Files
Plaque PictureDownload
EM PictureDownload
GenBank File for PhameratorDownload