Detailed Information for Phage PhillyPhilly |
Discovery Information |
Isolation Host | Microbacterium foliorum NRRL B-24224 |
Found By | Jack Kisielius |
Year Found | 2018 |
Location Found | Philadelphia, PA USA |
Finding Institution | University of the Sciences (now St. Joseph's Univ) |
Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
From enriched soil sample? | No |
Isolation Temperature | 24°C |
GPS Coordinates | 39.945098 N, 75.207592 W Map |
Discovery Notes | Little to no foot traffic from where the sample was collected. Exposed to sunlight; on top of a ridge; and near train tracks. |
Naming Notes | We named our phage PhillyPhilly in order to forever commemorate the Philadelphia Eagles winning Super Bowl 52. |
Sequencing Information |
Sequencing Complete? | Yes |
Date Sequencing Completed | Feb 8, 2019 |
Sequencing Facility | Pittsburgh Bacteriophage Institute |
Shotgun Sequencing Method | Illumina |
Approximate Shotgun Coverage | 1492 |
Genome length (bp) | 62869 |
Character of genome ends | Direct Terminal Repeat |
Direct Terminal Repeat Length | 3380 bp |
GC Content | 62.7% |
Sequencing Notes | This phage was sequenced as part of a mixed DOGEMS sample and later identified by PCR. |
Fasta file available? | Yes: Download fasta file |
Characterization |
Cluster | ED |
Subcluster | ED1 |
Cluster Life Cycle | Lytic |
Other Cluster Members |
|
Annotating Institution | University of the Sciences (now St. Joseph's Univ) |
Annotation Status | In GenBank |
Plaque Notes | Multiple plaque sizes, one size was 1 mm and the other plaque size was around 2.5 mm. Clear plaques were formed. |
Morphotype | Siphoviridae |
Number of Genes | 118 |
Number of tRNAs | 0 |
Number of tmRNAs | 0 |
Has been Phamerated? | Yes |
Gene List |
|
Submitted Minimal DNA Master File | Download |
Publication Info |
Uploaded to GenBank? | Yes |
GenBank Accession | MK937596 |
Refseq Number | None yet |
Archiving Info |
Archiving status |
Archived |
SEA Lysate Titer |
4.8 x 10^9 pfu/mL |
Pitt Freezer Box# |
84 |
Pitt Freezer Box Grid# |
E3 |
Available Files |
Plaque Picture | Download |
Restriction Digest Picture | Download |
EM Picture | Download |
GenBank File for Phamerator | Download |