Detailed Information for Phage RazorC |
Discovery Information |
Isolation Host | Gordonia rubripertincta NRRL B-16540 |
Found By | Lidhu Arakkal |
Year Found | 2024 |
Location Found | Fort Lauderdale, FL United States |
Finding Institution | Nova Southeastern University |
Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
From enriched soil sample? | Yes |
Isolation Temperature | 37°C |
GPS Coordinates | 26.07761 N, 80.25763 W Map |
Discovery Notes | The soil sample was collected at night just after a thunderstorm in an area with a lot of bushes. |
Naming Notes | The phage is named after the school mascot and the "c" refers to the building that the sample was collected from. |
Sequencing Information |
Sequencing Complete? | Yes |
Date Sequencing Completed | Dec 18, 2024 |
Sequencing Facility | Pittsburgh Bacteriophage Institute |
Shotgun Sequencing Method | Illumina |
Sequencer Used | Illumina NextSeq 1000 |
Read Type | Single-end reads |
Read Length | 100 bp |
Approximate Shotgun Coverage | 2751 |
Genome length (bp) | 65207 |
Character of genome ends | Circularly Permuted |
GC Content | 57.6% |
Fasta file available? | Yes: Download fasta file |
Characterization |
Cluster | DV |
Subcluster | -- |
Cluster Life Cycle | Unknown |
Other Cluster Members |
|
Annotating Institution | Nova Southeastern University |
Annotation Status | In GenBank |
Plaque Notes | The plaques found were round and clear at approximately 0.1cm in size. |
Number of Genes | 94 |
Number of tRNAs | 0 |
Number of tmRNAs | 0 |
Has been Phamerated? | Yes |
Gene List |
|
Submitted Annotation in DNA Master Format | Download |
Submitted Minimal DNA Master File | Download |
Author List | Download |
Annotation Cover Sheet | Download |
Publication Info |
Uploaded to GenBank? | Yes |
GenBank Accession | PV940989 |
Refseq Number | None yet |
Archiving Info |
Archiving status |
Archived |
Pitt Freezer Box# |
199 |
Pitt Freezer Box Grid# |
H10 |
Available Files |
GenBank File for Phamerator | Download |