Gordonia phage RazorC
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Detailed Information for Phage RazorC
Discovery Information
Isolation HostGordonia rubripertincta NRRL B-16540
Found ByLidhu Arakkal
Year Found2024
Location FoundFort Lauderdale, FL United States
Finding InstitutionNova Southeastern University
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?Yes
Isolation Temperature37°C
GPS Coordinates26.07761 N, 80.25763 W Map
Discovery NotesThe soil sample was collected at night just after a thunderstorm in an area with a lot of bushes.
Naming NotesThe phage is named after the school mascot and the "c" refers to the building that the sample was collected from.
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedDec 18, 2024
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina
Sequencer UsedIllumina NextSeq 1000
Read TypeSingle-end reads
Read Length100 bp
Approximate Shotgun Coverage2751
Genome length (bp)65207
Character of genome endsCircularly Permuted
GC Content57.6%
Fasta file available?Yes: Download fasta file
Characterization
ClusterDV
Subcluster--
Cluster Life CycleUnknown
Other Cluster Members
Annotating InstitutionNova Southeastern University
Annotation StatusIn GenBank
Plaque NotesThe plaques found were round and clear at approximately 0.1cm in size.
Number of Genes94
Number of tRNAs0
Number of tmRNAs0
Has been Phamerated?Yes
Gene List

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RazorC_1

RazorC_2
(terminase)

RazorC_3
(portal protein)

RazorC_4

RazorC_5

RazorC_6

RazorC_7

RazorC_8

RazorC_9

RazorC_10
(metalloprotease)

RazorC_11
(minor capsid protein)

RazorC_12

RazorC_13
(minor capsid protein)

RazorC_14
(major capsid protein)

RazorC_15

RazorC_16

RazorC_17
(head-to-tail stopper)

RazorC_18

RazorC_19
(tail terminator)

RazorC_20

RazorC_21
(major tail protein)

RazorC_22

RazorC_23

RazorC_24
(HNH endonuclease)

RazorC_25
(tape measure protein)

RazorC_26
(minor tail protein)

RazorC_27
(minor tail protein)

RazorC_28
(minor tail protein)

RazorC_29

RazorC_30

RazorC_31

RazorC_32

RazorC_33

RazorC_34

RazorC_35
(lysin A)

RazorC_36

RazorC_37

RazorC_38

RazorC_39

RazorC_40

RazorC_41

RazorC_42

RazorC_43

RazorC_44

RazorC_45

RazorC_46

RazorC_47

RazorC_48

RazorC_49

RazorC_50

RazorC_51

RazorC_52

RazorC_53

RazorC_54

RazorC_55

RazorC_56

RazorC_57

RazorC_58

RazorC_59

RazorC_60
(DNA helicase)

RazorC_61

RazorC_62

RazorC_63

RazorC_64

RazorC_65
(Cas4 family exonuclease)

RazorC_66

RazorC_67
(ASCE ATPase)

RazorC_68

RazorC_69
(oxidoreductase)

RazorC_70
(hydrolase)

RazorC_71

RazorC_72
(methyltransferase)

RazorC_73

RazorC_74
(oxidoreductase)

RazorC_75

RazorC_76

RazorC_77

RazorC_78
(DnaE-like DNA polymerase III (alpha))

RazorC_79
(MazG-like nucleotide pyrophosphohydrolase)

RazorC_80

RazorC_81

RazorC_82
(ThyX-like thymidylate synthase)

RazorC_83
(RuvC-like resolvase)

RazorC_84
(lysin B)

RazorC_85

RazorC_86
(DNA primase/polymerase)

RazorC_87

RazorC_88

RazorC_89

RazorC_90

RazorC_91

RazorC_92

RazorC_93

RazorC_94

Submitted Annotation in DNA Master FormatDownload
Submitted Minimal DNA Master FileDownload
Author ListDownload
Annotation Cover SheetDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionPV940989
Refseq NumberNone yet
Archiving Info
Archiving status Archived
Pitt Freezer Box# 199
Pitt Freezer Box Grid# H10
Available Files
GenBank File for PhameratorDownload