| Detailed Information for Phage Xenia2 | |
| Discovery Information | |
| Isolation Host | Gordonia rubripertincta NRRL B-16540 |
| Found By | Carol Agaiby |
| Year Found | 2023 |
| Location Found | Tampa, FL United States |
| Finding Institution | University of South Florida |
| Program | Phage Hunters Integrating Research and Education |
| From enriched soil sample? | No |
| Isolation Temperature | Not entered |
| GPS Coordinates | 28.066944 N, 82.414722 W Map |
| Discovery Notes | Found in a grassy area near a tree Soil was wet, dark and rich Soil was not sandy |
| Naming Notes | I chose the name Xenia because it is a Greek word meaning "hospitality" and signifies a long friendship. This was my first research project and my phage and I have been in it together all throughout my journey which is why I thought that friendship would be a perfect way to describe my phage. We will be friends forever! |
| Sequencing Information | |
| Sequencing Complete? | Yes |
| Date Sequencing Completed | Dec 6, 2023 |
| Sequencing Facility | Pittsburgh Bacteriophage Institute |
| Shotgun Sequencing Method | Illumina Sequencing |
| Approximate Shotgun Coverage | 921 |
| Genome length (bp) | 68135 |
| Character of genome ends | Circularly Permuted |
| GC Content | 57.9% |
| Fasta file available? | Yes: Download fasta file |
| Characterization | |
| Cluster | DV |
| Subcluster | -- |
| Cluster Life Cycle | Unknown |
| Other Cluster Members |
Click to ViewAlephilan Alyssamiracle Apeppi Avian BirthdayBoy DaviePasture DoobyDoo DumpTruck Erutan Fulcrum Genamy16 Gibbin GOATification GretelLyn Jalebi Jamemuya19 Lambo Lila22 LuckyLeo Mima20 MoiGyank NorManre NovaSharks OtterstedtS21 ParvusTarda Patos Ranch Rumi Sadboi Sampudon Tillicus Wojtek Xenia2 Yikes Zany |
| Annotating Institution | University of South Florida |
| Annotation Status | In GenBank |
| Plaque Notes | My phage creates both medium and large-sized plaques with jagged edges |
| Morphotype | Siphoviridae |
| Number of Genes | 96 |
| Number of tRNAs | 0 |
| Number of tmRNAs | 0 |
| Has been Phamerated? | Yes |
| Gene List |
Click to ViewXenia2_1 Xenia2_2 Xenia2_3 Xenia2_4 Xenia2_5 Xenia2_6 Xenia2_7 Xenia2_8 Xenia2_9 Xenia2_10 Xenia2_11 Xenia2_12 Xenia2_13 Xenia2_14 Xenia2_15 Xenia2_16 Xenia2_17 Xenia2_18 Xenia2_19 Xenia2_20 Xenia2_21 Xenia2_22 Xenia2_23 Xenia2_24 Xenia2_25 Xenia2_26 Xenia2_27 Xenia2_28 Xenia2_29 Xenia2_30 Xenia2_31 Xenia2_32 Xenia2_33 Xenia2_34 Xenia2_35 Xenia2_36 Xenia2_37 Xenia2_38 Xenia2_39 Xenia2_40 Xenia2_41 Xenia2_42 Xenia2_43 Xenia2_44 Xenia2_45 Xenia2_46 Xenia2_47 Xenia2_48 Xenia2_49 Xenia2_50 Xenia2_51 Xenia2_52 Xenia2_53 Xenia2_54 Xenia2_55 Xenia2_56 Xenia2_57 Xenia2_58 Xenia2_59 Xenia2_60 Xenia2_61 Xenia2_62 Xenia2_63 Xenia2_64 Xenia2_65 Xenia2_66 Xenia2_67 Xenia2_68 Xenia2_69 Xenia2_70 Xenia2_71 Xenia2_72 Xenia2_73 Xenia2_74 Xenia2_75 Xenia2_76 Xenia2_77 Xenia2_78 Xenia2_79 Xenia2_80 Xenia2_81 Xenia2_82 Xenia2_83 Xenia2_84 Xenia2_85 Xenia2_86 Xenia2_87 Xenia2_88 Xenia2_89 Xenia2_90 Xenia2_91 Xenia2_92 Xenia2_93 Xenia2_94 Xenia2_95 Xenia2_96 |
| Submitted Minimal DNA Master File | Download |
| Publication Info | |
| Uploaded to GenBank? | Yes |
| GenBank Accession | PP725409 |
| Refseq Number | None yet |
| Archiving Info | |
| Archiving status | Archived |
| Pitt Freezer Box# | 172 |
| Pitt Freezer Box Grid# | H2 |
| Available Files | |
| GenBank File for Phamerator | Download |