| Detailed Information for Phage Alkhayr | |
| Discovery Information | |
| Isolation Host | Mycobacterium smegmatis mc²155 |
| Found By | Laiba Imtiaz |
| Year Found | 2022 |
| Location Found | Albertson, NY United States |
| Finding Institution | SUNY Old Westbury |
| Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
| From enriched soil sample? | Yes |
| Isolation Temperature | 37°C |
| GPS Coordinates | 40.76806 N, 73.65333 W Map |
| Discovery Notes | The soil was dry/wet due to rain the prior day. Plants were growing on top. Fertilized soil for gardening. Landscape and above ground vegetation. |
| Naming Notes | It is an arabic word that translates to mean anything that is good or beneficial. |
| Sequencing Information | |
| Sequencing Complete? | Yes |
| Date Sequencing Completed | Jan 11, 2023 |
| Sequencing Facility | Pittsburgh Bacteriophage Institute |
| Shotgun Sequencing Method | Illumina |
| Approximate Shotgun Coverage | 2827 |
| Genome length (bp) | 70791 |
| Character of genome ends | 3' Sticky Overhang |
| Overhang Length | 4 bases |
| Overhang Sequence | GTGT |
| GC Content | 65.3% |
| Fasta file available? | Yes: Download fasta file |
| Characterization | |
| Cluster | O |
| Subcluster | -- |
| Cluster Life Cycle | Lytic |
| Other Cluster Members | |
| Annotating Institution | SUNY Old Westbury |
| Annotation Status | Awaiting_QC |
| Plaque Notes | The plaques were very small and a little fuzzy. The shape is somewhat circular with the edges a little uneven. The plaque size was 1.0 mm |
| Number of Genes | 121 |
| Number of tRNAs | 0 |
| Number of tmRNAs | 0 |
| Has been Phamerated? | Yes |
| Gene List |
Click to ViewAlkhayr_1 Alkhayr_2 Alkhayr_3 Alkhayr_4 Alkhayr_5 Alkhayr_6 Alkhayr_7 Alkhayr_8 Alkhayr_9 Alkhayr_10 Alkhayr_11 Alkhayr_12 Alkhayr_13 Alkhayr_14 Alkhayr_15 Alkhayr_16 Alkhayr_17 Alkhayr_18 Alkhayr_19 Alkhayr_20 Alkhayr_21 Alkhayr_22 Alkhayr_23 Alkhayr_24 Alkhayr_25 Alkhayr_26 Alkhayr_27 Alkhayr_28 Alkhayr_29 Alkhayr_30 Alkhayr_31 Alkhayr_32 Alkhayr_33 Alkhayr_34 Alkhayr_35 Alkhayr_36 Alkhayr_37 Alkhayr_38 Alkhayr_39 Alkhayr_40 Alkhayr_41 Alkhayr_42 Alkhayr_43 Alkhayr_44 Alkhayr_45 Alkhayr_46 Alkhayr_47 Alkhayr_48 Alkhayr_49 Alkhayr_50 Alkhayr_51 Alkhayr_52 Alkhayr_53 Alkhayr_54 Alkhayr_55 Alkhayr_56 Alkhayr_57 Alkhayr_58 Alkhayr_59 Alkhayr_60 Alkhayr_61 Alkhayr_62 Alkhayr_63 Alkhayr_64 Alkhayr_65 Alkhayr_66 Alkhayr_67 Alkhayr_68 Alkhayr_69 Alkhayr_70 Alkhayr_71 Alkhayr_72 Alkhayr_73 Alkhayr_74 Alkhayr_75 Alkhayr_76 Alkhayr_77 Alkhayr_78 Alkhayr_79 Alkhayr_80 Alkhayr_81 Alkhayr_82 Alkhayr_83 Alkhayr_84 Alkhayr_85 Alkhayr_86 Alkhayr_87 Alkhayr_88 Alkhayr_89 Alkhayr_90 Alkhayr_91 Alkhayr_92 Alkhayr_93 Alkhayr_94 Alkhayr_95 Alkhayr_96 Alkhayr_97 Alkhayr_98 Alkhayr_99 Alkhayr_100 Alkhayr_101 Alkhayr_102 Alkhayr_103 Alkhayr_104 Alkhayr_105 Alkhayr_106 Alkhayr_107 Alkhayr_108 Alkhayr_109 Alkhayr_110 Alkhayr_111 Alkhayr_112 Alkhayr_113 Alkhayr_114 Alkhayr_115 Alkhayr_116 Alkhayr_117 Alkhayr_118 Alkhayr_119 Alkhayr_120 Alkhayr_121 |
| Submitted Annotation in DNA Master Format | Download |
| Submitted Minimal DNA Master File | Download |
| Author List | Download |
| Annotation Cover Sheet | Download |
| Publication Info | |
| Uploaded to GenBank? | No |
| GenBank Accession | None yet |
| Refseq Number | None yet |
| Archiving Info | |
| Archiving status | Archived |
| Pitt Freezer Box# | 160 |
| Pitt Freezer Box Grid# | H10 |
| Available Files | |
| Plaque Picture | Download |
| EM Picture | Download |
