Gordonia phage Alyssamiracle
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Detailed Information for Phage Alyssamiracle
Discovery Information
Isolation HostGordonia rubripertincta NRRL B-16540
Found ByAlyssa Ortiz
Year Found2022
Location FoundDavie, FL United States
Finding InstitutionNova Southeastern University
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?Yes
Isolation Temperature30°C
GPS Coordinates26.0807 N, 80.24439 W Map
Discovery NotesI found it outside of my university building and the temperature was 88 degrees Fahrenheit. Lizards surrounded the area and it was 10:16 am. The soil was warm and moist and dark brown.
Naming NotesI created this title involving my name and the possibility that it might lead to a miracle or save a person's life.
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedDec 5, 2022
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina
Approximate Shotgun Coverage864
Genome length (bp)65525
Character of genome endsCircularly Permuted
GC Content57.6%
Fasta file available?Yes: Download fasta file
Characterization
ClusterDV
Subcluster--
Cluster Life CycleUnknown
Other Cluster Members
Annotating InstitutionNova Southeastern University
Annotation StatusIn GenBank
Plaque NotesThe plaques on the agar plate are minimally small and cloudy. All of them are the same in size and were constantly the same pigmentation.
Number of Genes97
Number of tRNAs0
Number of tmRNAs0
Has been Phamerated?Yes
Gene List

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Alyssamiracle_1

Alyssamiracle_2
(terminase)

Alyssamiracle_3
(portal protein)

Alyssamiracle_4

Alyssamiracle_5

Alyssamiracle_6

Alyssamiracle_7

Alyssamiracle_8

Alyssamiracle_9

Alyssamiracle_10
(metalloprotease)

Alyssamiracle_11
(minor capsid protein)

Alyssamiracle_12

Alyssamiracle_13
(minor capsid protein)

Alyssamiracle_14
(major capsid protein)

Alyssamiracle_15

Alyssamiracle_16

Alyssamiracle_17

Alyssamiracle_18
(head-to-tail stopper)

Alyssamiracle_19

Alyssamiracle_20
(tail terminator)

Alyssamiracle_21

Alyssamiracle_22

Alyssamiracle_23
(major tail protein)

Alyssamiracle_24

Alyssamiracle_25

Alyssamiracle_26
(HNH endonuclease)

Alyssamiracle_27
(tape measure protein)

Alyssamiracle_28
(minor tail protein)

Alyssamiracle_29
(minor tail protein)

Alyssamiracle_30
(minor tail protein)

Alyssamiracle_31

Alyssamiracle_32

Alyssamiracle_33

Alyssamiracle_34

Alyssamiracle_35

Alyssamiracle_36

Alyssamiracle_37
(lysin A)

Alyssamiracle_38

Alyssamiracle_39

Alyssamiracle_40

Alyssamiracle_41

Alyssamiracle_42

Alyssamiracle_43

Alyssamiracle_44

Alyssamiracle_45

Alyssamiracle_46

Alyssamiracle_47

Alyssamiracle_48

Alyssamiracle_49

Alyssamiracle_50

Alyssamiracle_51

Alyssamiracle_52

Alyssamiracle_53

Alyssamiracle_54

Alyssamiracle_55

Alyssamiracle_56

Alyssamiracle_57

Alyssamiracle_58

Alyssamiracle_59

Alyssamiracle_60

Alyssamiracle_61

Alyssamiracle_62

Alyssamiracle_63
(DNA helicase)

Alyssamiracle_64

Alyssamiracle_65

Alyssamiracle_66

Alyssamiracle_67

Alyssamiracle_68
(RecB-like exonuclease)

Alyssamiracle_69

Alyssamiracle_70
(RecA-like DNA recombinase)

Alyssamiracle_71

Alyssamiracle_72
(oxidoreductase)

Alyssamiracle_73
(hydrolase)

Alyssamiracle_74

Alyssamiracle_75
(methyltransferase)

Alyssamiracle_76

Alyssamiracle_77
(oxidoreductase)

Alyssamiracle_78

Alyssamiracle_79

Alyssamiracle_80

Alyssamiracle_81
(DnaE-like DNA polymerase)

Alyssamiracle_82
(MazG-like nucleotide pyrophosphohydrolase)

Alyssamiracle_83

Alyssamiracle_84

Alyssamiracle_85
(ThyX-like thymidylate synthase)

Alyssamiracle_86
(RuvC-like resolvase)

Alyssamiracle_87
(lysin B)

Alyssamiracle_88

Alyssamiracle_89
(DNA primase/polymerase)

Alyssamiracle_90

Alyssamiracle_91

Alyssamiracle_92

Alyssamiracle_93

Alyssamiracle_94

Alyssamiracle_95

Alyssamiracle_96

Alyssamiracle_97

Submitted Annotation in DNA Master FormatDownload
Submitted Minimal DNA Master FileDownload
Author ListDownload
Annotation Cover SheetDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionOR475254
Refseq NumberNone yet
Archiving Info
Archiving status Archived
Pitt Freezer Box# 162
Pitt Freezer Box Grid# C12
Available Files
Plaque PictureDownload
GenBank File for PhameratorDownload