Detailed Information for Phage Birdsong |
Discovery Information |
Isolation Host | Gordonia terrae 3612 |
Found By | Anagha Bandaru and Eva Mischler |
Year Found | 2021 |
Location Found | Pittsburgh, PA United States |
Finding Institution | University of Pittsburgh |
Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
From enriched soil sample? | No |
Isolation Temperature | 30°C |
GPS Coordinates | 40.440357 N, 79.955787 W Map |
Discovery Notes | Found in flower bed from Bouquet Square Gardens. |
Sequencing Information |
Sequencing Complete? | Yes |
Date Sequencing Completed | Jan 10, 2022 |
Sequencing Facility | Pittsburgh Bacteriophage Institute |
Shotgun Sequencing Method | Illumina |
Approximate Shotgun Coverage | 2045 |
Genome length (bp) | 53062 |
Character of genome ends | 3' Sticky Overhang |
Overhang Length | 10 bases |
Overhang Sequence | CGTTAGGCAT |
GC Content | 63.1% |
Fasta file available? | Yes: Download fasta file |
Characterization |
Cluster | DN |
Subcluster | -- |
Cluster Life Cycle | Temperate |
Lysogeny Notes | Our phage is a temperate phage because it has a hazy morphology. |
Other Cluster Members |
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Annotating Institution | University of Pittsburgh |
Annotation Status | In GenBank |
Plaque Notes | Plaque size for these clearings were around 2-4mm and circular. The plaques were evenly distributed on the plate. |
Number of Genes | 96 |
Number of tRNAs | 0 |
Number of tmRNAs | 0 |
Has been Phamerated? | Yes |
Gene List |
|
Submitted Minimal DNA Master File | Download |
Publication Info |
Uploaded to GenBank? | Yes |
GenBank Accession | PP208930 |
Refseq Number | None yet |
Archiving Info |
Archiving status |
Archived |
SEA Lysate Titer |
3.0x10^11 |
Pitt Freezer Box# |
141 |
Pitt Freezer Box Grid# |
A11 |
Available Files |
Plaque Picture | Download |
GenBank File for Phamerator | Download |