Detailed Information for Phage Blair | |
Discovery Information | |
Isolation Host | Arthrobacter sp. ATCC 21022 |
Found By | Brittany Savage |
Year Found | 2015 |
Location Found | Waco, TX USA |
Finding Institution | Baylor University |
Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
From enriched soil sample? | Yes |
Isolation Temperature | Not entered |
GPS Coordinates | 31.5514 N, 97.1558 W Map |
Discovery Notes | The soil came from a pebble-filled creek on Baylor University's campus. The soil was collected by Courtney Smith in 2014 but never processed. |
Naming Notes | I've always liked the name Blair, so I used that to name my phage. It also what I named my car. |
Sequencing Information | |
Sequencing Complete? | Yes |
Date Sequencing Completed | Feb 5, 2016 |
Sequencing Facility | Pittsburgh Bacteriophage Institute |
Shotgun Sequencing Method | Illumina Sequencing |
Approximate Shotgun Coverage | 5216 |
Genome length (bp) | 15556 |
Character of genome ends | 3' Sticky Overhang |
Overhang Length | 11 bases |
Overhang Sequence | CCCGCGCCACC |
GC Content | 59.6% |
Fasta file available? | Yes: Download fasta file |
Characterization | |
Cluster | AN |
Subcluster | -- |
Cluster Life Cycle | Lytic |
Other Cluster Members |
Click to ViewArby Arielagos Azathoth Blair CGermain Chestnut Copper Courtney3 Decurro Dewayne Elkhorn Guntur Hunnie Inspire2 Jessica Kels KylieMac Laila Link Lore LouisXIV Maggie Mariposa Massimo Moloch Muttlie Prospero Ronnie Sandman Saphira SerialPhiller Seume Sourignavong StewieGriff Stratus Swenson Taj14 TinoCrisci Toulouse TymAbreu Yank |
Annotating Institution | Baylor University |
Annotation Status | In GenBank |
Plaque Notes | My plaque was lytic. Its head is 45 nanometers and the tail is 100 nanometers. |
Morphotype | Siphoviridae |
Number of Genes | 26 |
Number of tRNAs | 0 |
Number of tmRNAs | 0 |
Has been Phamerated? | Yes |
Gene List |
Click to ViewBlair_1 Blair_2 Blair_3 Blair_4 Blair_5 Blair_6 Blair_7 Blair_8 Blair_9 Blair_10 Blair_11 Blair_12 Blair_13 Blair_14 Blair_15 Blair_16 Blair_17 Blair_18 Blair_19 Blair_20 Blair_21 Blair_22 Blair_23 Blair_24 Blair_25 Blair_26 |
Submitted Annotation in DNA Master Format | Download |
Submitted Minimal DNA Master File | Download |
Author List | Download |
Annotation Cover Sheet | Download |
Publication Info | |
Uploaded to GenBank? | Yes |
GenBank Accession | MK494103 |
Refseq Number | None yet |
Archiving Info | |
Archiving status | Archived |
SEA Lysate Titer | 4.71*10^-8 |
Date of SEA Lysate Titering | Dec 10, 2015 |
Pitt Freezer Box# | 21 |
Pitt Freezer Box Grid# | C7 |
Available Files | |
Plaque Picture | Download |
Restriction Digest Picture | Download |
EM Picture | Download |
GenBank File for Phamerator | Download |