Detailed Information for Phage Coleslaw |
Discovery Information |
Isolation Host | Mycobacterium smegmatis mc²155 |
Found By | Gillian Ciscell |
Year Found | 2020 |
Location Found | Fishers, IN United States |
Finding Institution | Hope College |
Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
From enriched soil sample? | Yes |
Isolation Temperature | 37°C |
GPS Coordinates | 39.97556 N, 85.96757 W Map |
Discovery Notes | The soil was a moist texture, dark in color, the ground was hard, and it was taken from under a log. It had rained the day prior. |
Sequencing Information |
Sequencing Complete? | Yes |
Date Sequencing Completed | Dec 21, 2020 |
Sequencing Facility | Pittsburgh Bacteriophage Institute |
Shotgun Sequencing Method | Illumina |
Approximate Shotgun Coverage | 1604 |
Genome length (bp) | 41893 |
Character of genome ends | 3' Sticky Overhang |
Overhang Length | 11 bases |
Overhang Sequence | CCCCATGGCAT |
GC Content | 66.6% |
Fasta file available? | Yes: Download fasta file |
Characterization |
Cluster | G |
Subcluster | G1 |
Cluster Life Cycle | Temperate |
Other Cluster Members |
|
Annotating Institution | Howard University |
Annotation Status | In GenBank |
Plaque Notes | Has three distinct plaque morphologies. This is a pure phage stock because three purification assays were completed and the same three plaque types were consistently yielded. |
Morphotype | Siphoviridae |
Number of Genes | 62 |
Number of tRNAs | 0 |
Number of tmRNAs | 0 |
Has been Phamerated? | Yes |
Gene List |
|
Submitted Annotation in DNA Master Format | Download |
Submitted Minimal DNA Master File | Download |
Author List | Download |
Annotation Cover Sheet | Download |
Publication Info |
Uploaded to GenBank? | Yes |
GenBank Accession | MZ747508 |
Refseq Number | None yet |
Archiving Info |
Archiving status |
Archived |
Pitt Freezer Box# |
117 |
Pitt Freezer Box Grid# |
B9 |
Available Files |
Plaque Picture | Download |
Restriction Digest Picture | Download |
GenBank File for Phamerator | Download |