Mycobacterium phage Rabbs
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Detailed Information for Phage Rabbs
Discovery Information
Isolation HostMycobacterium smegmatis mc²155
Found ByJesus M. Suarez
Year Found2017
Location FoundKingsville, TX USA
Finding InstitutionDel Mar College
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?Yes
Isolation TemperatureNot entered
GPS Coordinates27.386944 N, 97.806944 W Map
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedJan 16, 2018
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina Sequencing
Approximate Shotgun Coverage2866
Genome length (bp)42430
Character of genome ends3' Sticky Overhang
Overhang Length10 bases
Overhang SequenceCCCATGGCAT
End Determination NotesTwo clear buildups of read starts heading in opposite directions with a 10-base sequence between them.
GC Content66.4%
Sequencing NotesThough most G1s, including the closely-related Sneeze, have 11-base 3' overhangs, this genome quite clearly has only a 10-base overhang. There appears to be a T to C nucleotide change right near the physical end of the genome which has moved the cut site over by a base.
Fasta file available?Yes: Download fasta file
Cluster Life CycleTemperate
Other Cluster Members
Annotating InstitutionDel Mar College
Annotation StatusIn GenBank
Plaque NotesThe plaque morphology is lytic.
Has been Phamerated?Yes
Gene List
Submitted Annotation in DNA Master FormatDownload
Submitted Minimal DNA Master FileDownload
Author ListDownload
Annotation Cover SheetDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionMK524494
Refseq NumberNone yet
Archiving Info
Archiving status Archived
Pitt Freezer Box# 71
Pitt Freezer Box Grid# F9
Available Files
Plaque PictureDownload
EM PictureDownload
GenBank File for PhameratorDownload