Detailed Information for Phage ECartman |
Discovery Information |
Isolation Host | Mycobacterium smegmatis mc²155 |
Found By | Tomi Oasis Simmons |
Year Found | 2023 |
Location Found | Staffordsville, VA USA |
Finding Institution | Virginia Western Community College |
Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
From enriched soil sample? | Yes |
Isolation Temperature | Not entered |
GPS Coordinates | 37.258139 N, 80.713417 W Map |
Discovery Notes | The soil came from around a chicken/duck coup. About half an inch under a layer of hay. |
Naming Notes | Eric Cartman from South Park |
Sequencing Information |
Sequencing Complete? | Yes |
Date Sequencing Completed | Jan 16, 2024 |
Sequencing Facility | Pittsburgh Bacteriophage Institute |
Shotgun Sequencing Method | Illumina Sequencing |
Approximate Shotgun Coverage | 1589 |
Genome length (bp) | 41901 |
Character of genome ends | 3' Sticky Overhang |
Overhang Length | 11 bases |
Overhang Sequence | CCCCATGGCAT |
GC Content | 66.6% |
Fasta file available? | Yes: Download fasta file |
Characterization |
Cluster | G |
Subcluster | G1 |
Cluster Life Cycle | Temperate |
Other Cluster Members |
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Annotating Institution | Virginia Western Community College |
Annotation Status | In GenBank |
Morphotype | Siphoviridae |
Number of Genes | 61 |
Number of tRNAs | 0 |
Number of tmRNAs | 0 |
Has been Phamerated? | Yes |
Gene List |
|
Submitted Annotation in DNA Master Format | Download |
Submitted Minimal DNA Master File | Download |
Author List | Download |
Annotation Cover Sheet | Download |
Publication Info |
Uploaded to GenBank? | Yes |
GenBank Accession | PQ362666 |
Refseq Number | None yet |
Archiving Info |
Archiving status |
Archived |
Pitt Freezer Box# |
186 |
Pitt Freezer Box Grid# |
A2 |
Available Files |
GenBank File for Phamerator | Download |