Microbacterium phage EarickHC
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Detailed Information for Phage EarickHC
Discovery Information
Isolation HostMicrobacterium foliorum NRRL B-24224
Found ByEarick Jastine Cagang
Year Found2021
Location FoundRiverside, CA United States
Finding InstitutionLa Sierra University
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?Yes
Isolation Temperature26°C
GPS Coordinates33.910113 N, 117.51028 W Map
Discovery NotesRight next to a leaking pipe, very moist, up in the mountains, dark soil, lots of shrubs surrounding the place, soil was full of tiny twigs, and dug on the surface level of soil.
Naming NotesMy first name with my middle and last name initials.
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedJan 17, 2022
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina
Approximate Shotgun Coverage29
Genome length (bp)52992
Character of genome endsCircularly Permuted
GC Content68.9%
Fasta file available?Yes: Download fasta file
Characterization
ClusterEC
Subcluster--
Cluster Life CycleLytic
Other Cluster Members
Annotating InstitutionLa Sierra University
Annotation StatusIn GenBank
Plaque NotesSmall, Clear, Round
Number of Genes91
Number of tRNAs0
Number of tmRNAs0
Has been Phamerated?Yes
Gene List

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EarickHC_1
(terminase small subunit)

EarickHC_2

EarickHC_3
(terminase)

EarickHC_4

EarickHC_5

EarickHC_6

EarickHC_7

EarickHC_8

EarickHC_9

EarickHC_10

EarickHC_11

EarickHC_12

EarickHC_13

EarickHC_14

EarickHC_15

EarickHC_16

EarickHC_17

EarickHC_18

EarickHC_19

EarickHC_20
(portal protein)

EarickHC_21

EarickHC_22

EarickHC_23

EarickHC_24

EarickHC_25
(capsid maturation protease)

EarickHC_26

EarickHC_27
(major capsid protein)

EarickHC_28

EarickHC_29

EarickHC_30
(major tail protein)

EarickHC_31
(head-to-tail adaptor)

EarickHC_32

EarickHC_33

EarickHC_34
(tail assembly chaperone)

EarickHC_35
(tail assembly chaperone)

EarickHC_36
(tape measure protein)

EarickHC_37
(minor tail protein)

EarickHC_38
(minor tail protein)

EarickHC_39
(minor tail protein)

EarickHC_40
(minor tail protein)

EarickHC_41

EarickHC_42

EarickHC_43
(endolysin)

EarickHC_44

EarickHC_45

EarickHC_46

EarickHC_47

EarickHC_48
(exonuclease)

EarickHC_49
(ERF family ssDNA binding protein)

EarickHC_50

EarickHC_51

EarickHC_52
(helix-turn-helix DNA binding domain protein)

EarickHC_53
(ADP-ribosyltransferase)

EarickHC_54
(HNH endonuclease)

EarickHC_55

EarickHC_56

EarickHC_57

EarickHC_58

EarickHC_59

EarickHC_60
(helix-turn-helix DNA binding domain protein)

EarickHC_61

EarickHC_62
(DNA ligase)

EarickHC_63

EarickHC_64

EarickHC_65
(ssDNA binding protein)

EarickHC_66

EarickHC_67
(DNA binding protein)

EarickHC_68
(DNA binding protein)

EarickHC_69

EarickHC_70

EarickHC_71

EarickHC_72

EarickHC_73

EarickHC_74

EarickHC_75

EarickHC_76

EarickHC_77

EarickHC_78

EarickHC_79

EarickHC_80

EarickHC_81

EarickHC_82

EarickHC_83
(DNA binding protein)

EarickHC_84
(ParB-like nuclease domain protein)

EarickHC_85

EarickHC_86
(glycosyltransferase)

EarickHC_87
(UDP-glucose dehydrogenase)

EarickHC_88
(AAA-ATPase)

EarickHC_89

EarickHC_90

EarickHC_91

Submitted Minimal DNA Master FileDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionOP068338
Refseq NumberNone yet
Archiving Info
Archiving status Archived
Pitt Freezer Box# 146
Pitt Freezer Box Grid# E12
Available Files
GenBank File for PhameratorDownload