Microbacterium phage Ganandorf
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Detailed Information for Phage Ganandorf
Discovery Information
Isolation HostMicrobacterium foliorum NRRL B-24224
Found ByKatelyn Kaase and Elijah Rodriguez
Year Found2023
Location FoundStephenville, TX United States
Finding InstitutionTarleton State University
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?No
Isolation Temperature24°C
GPS Coordinates32.25634 N, 98.21932 W Map
Discovery NotesThe sample was located in an anthill in the sideyard of the collector’s home. The sample was found around the surface level to 2 cm deep in the anthill.
Naming NotesThe name of our phage took inspiration from a popular Nintendo character Ganondorf from the Legend of Zelda.
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedDec 27, 2023
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina Sequencing
Approximate Shotgun Coverage24
Genome length (bp)52941
Character of genome endsCircularly Permuted
GC Content68.9%
Fasta file available?Yes: Download fasta file
Characterization
ClusterEC
Subcluster--
Cluster Life CycleLytic
Other Cluster Members
Annotating InstitutionTarleton State University
Annotation StatusQC Complete
MorphotypeSiphoviridae
Has been Phamerated?Yes
Gene List

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Ganandorf_1
(terminase, small subunit)

Ganandorf_2

Ganandorf_3
(terminase, large subunit)

Ganandorf_4

Ganandorf_5

Ganandorf_6

Ganandorf_7

Ganandorf_8

Ganandorf_9

Ganandorf_10

Ganandorf_11

Ganandorf_12

Ganandorf_13

Ganandorf_14

Ganandorf_15

Ganandorf_16

Ganandorf_17

Ganandorf_18

Ganandorf_19
(portal protein)

Ganandorf_20

Ganandorf_21

Ganandorf_22

Ganandorf_23

Ganandorf_24
(capsid maturation protease)

Ganandorf_25

Ganandorf_26
(major capsid hexamer protein)

Ganandorf_27
(major capsid pentamer protein)

Ganandorf_28

Ganandorf_29
(major tail protein)

Ganandorf_30
(head-to-tail adaptor)

Ganandorf_31

Ganandorf_32

Ganandorf_33
(tail assembly chaperone)

Ganandorf_34

Ganandorf_35
(tape measure protein)

Ganandorf_36
(minor tail protein)

Ganandorf_37
(minor tail protein)

Ganandorf_38
(minor tail protein)

Ganandorf_39
(minor tail protein)

Ganandorf_40

Ganandorf_41

Ganandorf_42
(endolysin)

Ganandorf_43

Ganandorf_44

Ganandorf_45

Ganandorf_46

Ganandorf_47
(exonuclease)

Ganandorf_48
(ERF family DNA pairing protein)

Ganandorf_49

Ganandorf_50

Ganandorf_51
(helix-turn-helix DNA binding domain)

Ganandorf_52

Ganandorf_53
(HNH endonuclease)

Ganandorf_54

Ganandorf_55

Ganandorf_56

Ganandorf_57

Ganandorf_58
(helix-turn-helix DNA binding domain)

Ganandorf_59

Ganandorf_60
(DNA ligase)

Ganandorf_61

Ganandorf_62

Ganandorf_63
(SSB protein)

Ganandorf_64

Ganandorf_65
(helix-turn-helix DNA binding domain)

Ganandorf_66
(helix-turn-helix DNA binding domain)

Ganandorf_67

Ganandorf_68

Ganandorf_69

Ganandorf_70

Ganandorf_71

Ganandorf_72

Ganandorf_73

Ganandorf_74

Ganandorf_75

Ganandorf_76

Ganandorf_77

Ganandorf_78

Ganandorf_79

Ganandorf_80
(DNA binding protein)

Ganandorf_81
(ParB-like nuclease domain)

Ganandorf_82
(glycosyltransferase)

Ganandorf_83
(UDP-glucose dehydrogenase)

Ganandorf_84
(AAA-ATPase)

Ganandorf_85

Ganandorf_86

Ganandorf_87

Ganandorf_88

Ganandorf_89

Submitted Minimal DNA Master FileDownload
Publication Info
Uploaded to GenBank?No
GenBank AccessionNone yet
Refseq NumberNone yet
Archiving Info
Archiving status Archived
SEA Lysate Titer 1.5 x 10^10 pfu/ml
Pitt Freezer Box# 169
Pitt Freezer Box Grid# B7
Available Files
Plaque PictureDownload
Restriction Digest PictureDownload
EM PictureDownload
GenBank File for PhameratorDownload