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Microbacterium phage Shotgun
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Detailed Information for Phage Shotgun
Discovery Information
Isolation HostMicrobacterium foliorum NRRL B-24224
Found ByNick Forster
Year Found2020
Location FoundRadford, VA United States
Finding InstitutionRadford University
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?No
Isolation Temperature30°C
GPS Coordinates37.1398 N, 80.5403 W Map
Discovery NotesFound near river bed, about an inch deep
temp was 87 degrees F
Soil was wet and sandy
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedJan 6, 2021
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina Sequencing
Approximate Shotgun Coverage55
Genome length (bp)52659
Character of genome endsCircularly Permuted
GC Content68.9%
Fasta file available?Yes: Download fasta file
Characterization
ClusterEC
Subcluster--
Cluster Life CycleLytic
Other Cluster Members
Annotating InstitutionRadford University
Annotation StatusIn GenBank
Has been Phamerated?Yes
Gene List

Click to View

Shotgun_1
(terminase small subunit)

Shotgun_2

Shotgun_3
(terminase large subunit)

Shotgun_4

Shotgun_5

Shotgun_6

Shotgun_7

Shotgun_8

Shotgun_9

Shotgun_10

Shotgun_11

Shotgun_12

Shotgun_13

Shotgun_14

Shotgun_15

Shotgun_16

Shotgun_17

Shotgun_18

Shotgun_19
(portal protein)

Shotgun_20

Shotgun_21

Shotgun_22

Shotgun_23

Shotgun_24
(capsid maturation protease)

Shotgun_25

Shotgun_26
(major capsid protein)

Shotgun_27

Shotgun_28

Shotgun_29
(major tail protein)

Shotgun_30
(head-to-tail adaptor)

Shotgun_31

Shotgun_32

Shotgun_33
(tail assembly chaperone)

Shotgun_34
(tail assembly chaperone)

Shotgun_35
(tape measure protein)

Shotgun_36
(minor tail protein)

Shotgun_37
(minor tail protein)

Shotgun_38
(minor tail protein)

Shotgun_39
(minor tail protein)

Shotgun_40

Shotgun_41

Shotgun_42
(lysin A)

Shotgun_43

Shotgun_44

Shotgun_45

Shotgun_46

Shotgun_47
(exonuclease)

Shotgun_48
(ERF family ssDNA binding protein)

Shotgun_49

Shotgun_50

Shotgun_51
(helix-turn-helix DNA binding domain protein)

Shotgun_52
(ADP-ribosyltransferase)

Shotgun_53
(HNH endonuclease)

Shotgun_54

Shotgun_55

Shotgun_56

Shotgun_57

Shotgun_58

Shotgun_59
(helix-turn-helix DNA binding domain protein)

Shotgun_60

Shotgun_61

Shotgun_62

Shotgun_63

Shotgun_64
(ssDNA binding protein)

Shotgun_65

Shotgun_66
(helix-turn-helix DNA binding domain protein)

Shotgun_67
(helix-turn-helix DNA binding domain protein)

Shotgun_68

Shotgun_69

Shotgun_70

Shotgun_71

Shotgun_72

Shotgun_73

Shotgun_74

Shotgun_75

Shotgun_76

Shotgun_77

Shotgun_78

Shotgun_79

Shotgun_80

Shotgun_81
(DNA binding protein)

Shotgun_82
(ParB-like nuclease domain)

Shotgun_83

Shotgun_84
(glycosyltransferase)

Shotgun_85
(UDP-glucose dehydrogenase)

Shotgun_86
(AAA-ATPase)

Shotgun_87

Shotgun_88

Shotgun_89

Shotgun_90

Submitted Annotation in DNA Master FormatDownload
Submitted Minimal DNA Master FileDownload
Author ListDownload
Annotation Cover SheetDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionMZ648035
Refseq NumberNone yet
Archiving Info
Archiving status Archived
SEA Lysate Titer 3.7x10^10
Pitt Freezer Box# 127
Pitt Freezer Box Grid# E12
Available Files
Plaque PictureDownload
EM PictureDownload
GenBank File for PhameratorDownload