Detailed Information for Phage FrodoSwaggins |
Discovery Information |
Isolation Host | Streptomyces griseus ATCC 10137 |
Found By | Diego Hughes |
Year Found | 2019 |
Location Found | Denton, TX USA |
Finding Institution | University of North Texas |
Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
From enriched soil sample? | Yes |
Isolation Temperature | 30°C |
GPS Coordinates | 33.230003 N, 97.150249 W Map |
Discovery Notes | Collected 1/14/19 Moist clumpy dirt, black color 3.8°C |
Naming Notes | Name:FrodoSwaggins I was inspired by Lord of the Rings |
Sequencing Information |
Sequencing Complete? | Yes |
Date Sequencing Completed | Jun 26, 2019 |
Sequencing Facility | Pittsburgh Bacteriophage Institute |
Shotgun Sequencing Method | Illumina Sequencing |
Approximate Shotgun Coverage | 1246 |
Genome length (bp) | 56472 |
Character of genome ends | 3' Sticky Overhang |
Overhang Length | 9 bases |
Overhang Sequence | CGCCCGCCT |
GC Content | 59.4% |
Fasta file available? | Yes: Download fasta file |
Characterization |
Cluster | BI |
Subcluster | BI1 |
Cluster Life Cycle | Lytic |
Lysogeny Notes | I received no positive results from lysogeny tests, but it is possible that lysogens could form. |
Other Cluster Members |
|
Annotating Institution | University of North Texas |
Annotation Status | In GenBank |
Plaque Notes | The plaques were generally formed to be about 0.7mm-0.9mm, clear, circular, and clumped closely to other plaques. |
Number of Genes | 84 |
Number of tRNAs | 0 |
Number of tmRNAs | 0 |
Has been Phamerated? | Yes |
Gene List |
|
Submitted Minimal DNA Master File | Download |
Publication Info |
Uploaded to GenBank? | Yes |
GenBank Accession | MN586054 |
Refseq Number | None yet |
Archiving Info |
Archiving status |
Archived |
SEA Lysate Titer |
4.0x10^8 pfu/ml |
Pitt Freezer Box# |
104 |
Pitt Freezer Box Grid# |
B3 |
Available Files |
Plaque Picture | Download |
EM Picture | Download |
GenBank File for Phamerator | Download |