Streptomyces phage Spectropatronm
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Detailed Information for Phage Spectropatronm
Discovery Information
Isolation HostStreptomyces griseus ATCC 10137
Former namesStreptopatronm
Found ByTaylor Douglas
Year Found2016
Location FoundJustin, TX USA
Finding InstitutionUniversity of North Texas
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?Yes
Isolation TemperatureNot entered
GPS Coordinates33.085432 N, 97.302528 W Map
Discovery NotesThe soil was found to be a dark brown color and moist with a local air temperature at the time of collection measured to be 34 degrees Fahrenheit.
Naming NotesThe name of the phage came from a creative name for a phage that made all the bacteria "disappear" or invisible (infected) at low dilution concentrations, showing a highly concentrated phage early on. Also a reference to my favorite film series.
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedJul 13, 2016
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina Sequencing
Approximate Shotgun Coverage3022
Genome length (bp)55707
Character of genome ends3' Sticky Overhang
Overhang Length9 bases
Overhang SequenceCGCCCGCCT
GC Content59.5%
Sequencing Notesat 56800 bp aprox 25% of reads are a C instead of consensus T
Fasta file available?Yes: Download fasta file
Characterization
ClusterBI
SubclusterBI1
Cluster Life CycleLytic
Other Cluster Members
Annotating InstitutionUnknown or unassigned
Annotation StatusIn GenBank
Plaque NotesPlaques are clear with no fuzzy edges, ruling out the temperate phage plaque morphology. Plaques average 2-3 mm and are usually round and clear.
MorphotypeSiphoviridae
Number of Genes84
Has been Phamerated?Yes
Gene List

Click to View

Spectropatronm_1

Spectropatronm_2
(HNH endonuclease)

Spectropatronm_3

Spectropatronm_4

Spectropatronm_5
(endolysin)

Spectropatronm_6

Spectropatronm_7

Spectropatronm_8
(terminase large subunit)

Spectropatronm_9

Spectropatronm_10

Spectropatronm_11

Spectropatronm_12
(portal protein)

Spectropatronm_13

Spectropatronm_14
(capsid maturation protease)

Spectropatronm_15

Spectropatronm_16

Spectropatronm_17
(major tail protein)

Spectropatronm_18

Spectropatronm_19
(major tail protein)

Spectropatronm_20

Spectropatronm_21
(chitosanase)

Spectropatronm_22

Spectropatronm_23
(tape measure protein)

Spectropatronm_24
(minor tail protein)

Spectropatronm_25
(minor tail protein)

Spectropatronm_26

Spectropatronm_27

Spectropatronm_28

Spectropatronm_29

Spectropatronm_30

Spectropatronm_31

Spectropatronm_32

Spectropatronm_33

Spectropatronm_34

Spectropatronm_35

Spectropatronm_36

Spectropatronm_37

Spectropatronm_38

Spectropatronm_39

Spectropatronm_40

Spectropatronm_41

Spectropatronm_42

Spectropatronm_43

Spectropatronm_44

Spectropatronm_45

Spectropatronm_46

Spectropatronm_47

Spectropatronm_48

Spectropatronm_49

Spectropatronm_50

Spectropatronm_51

Spectropatronm_52

Spectropatronm_53

Spectropatronm_54

Spectropatronm_55

Spectropatronm_56

Spectropatronm_57

Spectropatronm_58

Spectropatronm_59

Spectropatronm_60
(DNA polymerase/primase)

Spectropatronm_61

Spectropatronm_62

Spectropatronm_63

Spectropatronm_64

Spectropatronm_65

Spectropatronm_66

Spectropatronm_67

Spectropatronm_68

Spectropatronm_69

Spectropatronm_70

Spectropatronm_71

Spectropatronm_72

Spectropatronm_73

Spectropatronm_74

Spectropatronm_75
(thymidylate kinase)

Spectropatronm_76

Spectropatronm_77

Spectropatronm_78

Spectropatronm_79

Spectropatronm_80
(helicase)

Spectropatronm_81

Spectropatronm_82
(hydrolase)

Spectropatronm_83
(ATP-dependent helicase)

Spectropatronm_84
(HTH DNA binding domain protein)

Spectropatronm_85

Submitted Minimal DNA Master FileDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionMF467949
Refseq NumberNone yet
Archiving Info
Archiving status Archived
SEA Lysate Titer 1x10^10 pfu/mL
Pitt Freezer Box# 36
Pitt Freezer Box Grid# H11
Available Files
GenBank File for PhameratorDownload