Detailed Information for Phage Jaylociraptor |
Discovery Information |
Isolation Host | Streptomyces griseus ATCC 10137 |
Found By | Sonya Layton |
Year Found | 2018 |
Location Found | Denton, TX USA |
Finding Institution | University of North Texas |
Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
From enriched soil sample? | Yes |
Isolation Temperature | Not entered |
GPS Coordinates | 33.21171 N, 97.148628 W Map |
Discovery Notes | It was around 80F outside when the soil was collected. The soil was moist. The phage was isolated on 0.15% agarose in an attempt to get a jumbophage. |
Naming Notes | I already named a phage a dinosaur name so I thought I would keep it going. It is named after my husband with a dinosaur suffix. |
Sequencing Information |
Sequencing Complete? | Yes |
Date Sequencing Completed | Jan 16, 2019 |
Sequencing Facility | University of North Texas |
Shotgun Sequencing Method | Illumina Sequencing |
Approximate Shotgun Coverage | 98 |
Genome length (bp) | 55699 |
Character of genome ends | 3' Sticky Overhang |
Overhang Length | 9 bases |
Overhang Sequence | CGCCCGCCT |
GC Content | 59.5% |
Fasta file available? | Yes: Download fasta file |
Characterization |
Cluster | BI |
Subcluster | BI1 |
Cluster Life Cycle | Lytic |
Other Cluster Members |
|
Annotating Institution | University of North Texas |
Annotation Status | In GenBank |
Plaque Notes | On 0.15% top agarose, the plaques were comet shaped and about 1.5mm in diameter. They were clear. |
Has been Phamerated? | Yes |
Gene List |
|
Submitted Minimal DNA Master File | Download |
Publication Info |
Uploaded to GenBank? | Yes |
GenBank Accession | MN204494 |
Refseq Number | None yet |
Archiving Info |
Archiving status |
Archived |
Pitt Freezer Box# |
75 |
Pitt Freezer Box Grid# |
C9 |
Available Files |
Plaque Picture | Download |
Restriction Digest Picture | Download |
GenBank File for Phamerator | Download |