Detailed Information for Phage GoongGoong | |
Discovery Information | |
Isolation Host | Mycobacterium smegmatis mc²155 |
Found By | Melissa Barnett |
Year Found | 2024 |
Location Found | Ottawa, Canada |
Finding Institution | University of Ottawa |
Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
From enriched soil sample? | Yes |
Isolation Temperature | 22°C |
GPS Coordinates | 45.30115 N, 75.99142 W Map |
Discovery Notes | The soil sample containing GoongGoong was found next to a pond in Covered Bridge Path. |
Naming Notes | This phage is named in honour of my dear Goong Goong, which means grandfather in Chinese. His bravery, strength, and resilience helped him win his battle against a serious bacterial infection, which is why I want to name my phage after him. |
Sequencing Information | |
Sequencing Complete? | Yes |
Date Sequencing Completed | Jan 6, 2025 |
Sequencing Facility | Pittsburgh Bacteriophage Institute |
Shotgun Sequencing Method | Illumina |
Sequencer Used | Illumina NextSeq 1000 |
Read Type | Single-end reads |
Read Length | 100 bp |
Approximate Shotgun Coverage | 741 |
Genome length (bp) | 65050 |
Character of genome ends | 3' Sticky Overhang |
Overhang Length | 11 bases |
Overhang Sequence | GCGCGCAGCGC |
GC Content | 63.4% |
Fasta file available? | Yes: Download fasta file |
Characterization | |
Cluster | S |
Subcluster | -- |
Cluster Life Cycle | Lytic |
Other Cluster Members | |
Annotating Institution | Unknown or unassigned |
Annotation Status | Planless |
Plaque Notes | Forms very small plaques. |
Morphotype | Siphoviridae |
Number of Genes | 112 |
Number of tRNAs | 0 |
Number of tmRNAs | 0 |
Has been Phamerated? | Yes |
Gene List |
Click to ViewGoongGoong_1 GoongGoong_2 GoongGoong_3 GoongGoong_4 GoongGoong_5 GoongGoong_6 GoongGoong_7 GoongGoong_8 GoongGoong_9 GoongGoong_10 GoongGoong_11 GoongGoong_12 GoongGoong_13 GoongGoong_14 GoongGoong_15 GoongGoong_16 GoongGoong_17 GoongGoong_18 GoongGoong_19 GoongGoong_20 GoongGoong_21 GoongGoong_22 GoongGoong_23 GoongGoong_24 GoongGoong_25 GoongGoong_26 GoongGoong_27 GoongGoong_28 GoongGoong_29 GoongGoong_30 GoongGoong_31 GoongGoong_32 GoongGoong_33 GoongGoong_34 GoongGoong_35 GoongGoong_36 GoongGoong_37 GoongGoong_38 GoongGoong_39 GoongGoong_40 GoongGoong_41 GoongGoong_42 GoongGoong_43 GoongGoong_44 GoongGoong_45 GoongGoong_46 GoongGoong_47 GoongGoong_48 GoongGoong_49 GoongGoong_50 GoongGoong_51 GoongGoong_52 GoongGoong_53 GoongGoong_54 GoongGoong_55 GoongGoong_56 GoongGoong_57 GoongGoong_58 GoongGoong_59 GoongGoong_60 GoongGoong_61 GoongGoong_62 GoongGoong_63 GoongGoong_64 GoongGoong_65 GoongGoong_66 GoongGoong_67 GoongGoong_68 GoongGoong_69 GoongGoong_70 GoongGoong_71 GoongGoong_72 GoongGoong_73 GoongGoong_74 GoongGoong_75 GoongGoong_76 GoongGoong_77 GoongGoong_78 GoongGoong_79 GoongGoong_80 GoongGoong_81 GoongGoong_82 GoongGoong_83 GoongGoong_84 GoongGoong_85 GoongGoong_86 GoongGoong_87 GoongGoong_88 GoongGoong_89 GoongGoong_90 GoongGoong_91 GoongGoong_92 GoongGoong_93 GoongGoong_94 GoongGoong_95 GoongGoong_96 GoongGoong_97 GoongGoong_98 GoongGoong_99 GoongGoong_100 GoongGoong_101 GoongGoong_102 GoongGoong_103 GoongGoong_104 GoongGoong_105 GoongGoong_106 GoongGoong_107 GoongGoong_108 GoongGoong_109 GoongGoong_110 GoongGoong_111 GoongGoong_112 |
Publication Info | |
Uploaded to GenBank? | No |
GenBank Accession | None yet |
Refseq Number | None yet |
Archiving Info | |
Archiving status | Not in Pitt Archives |
Available Files | |
Plaque Picture | Download |
Restriction Digest Picture | Download |
EM Picture | Download |