Mycobacterium phage RedRaider77
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Detailed Information for Phage RedRaider77
Discovery Information
Isolation HostMycobacterium smegmatis mc²155
Former namesTrumpTrain
Found ByPaxton DeHaan
Year Found2018
Location FoundColorado Springs, CO United States
Finding InstitutionNorthwestern College
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?No
Isolation Temperature37°C
GPS Coordinates38.885732 N, 104.707011 W Map
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedSep 25, 2018
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina Sequencing
Approximate Shotgun Coverage249
Genome length (bp)64827
Character of genome ends3' Sticky Overhang
Overhang Length11 bases
Overhang SequenceGCGCGCAGCGC
GC Content63.4%
Fasta file available?Yes: Download fasta file
Characterization
ClusterS
Subcluster--
Cluster Life CycleLytic
Other Cluster Members
Annotation StatusQC Complete
Plaque NotesPlaques appear to be circular with a clear middle and foggy outside ring.
MorphotypeSiphoviridae
Has been Phamerated?Yes
Gene List

Click to View

RedRaider77_1

RedRaider77_2

RedRaider77_3

RedRaider77_4

RedRaider77_5

RedRaider77_6

RedRaider77_7

RedRaider77_8

RedRaider77_9

RedRaider77_10

RedRaider77_11

RedRaider77_12

RedRaider77_13

RedRaider77_14

RedRaider77_15

RedRaider77_16

RedRaider77_17

RedRaider77_18

RedRaider77_19

RedRaider77_20

RedRaider77_21

RedRaider77_22

RedRaider77_23

RedRaider77_24
(helix-turn-helix DNA binding domain)

RedRaider77_25

RedRaider77_26

RedRaider77_27

RedRaider77_28

RedRaider77_29

RedRaider77_30

RedRaider77_31

RedRaider77_32
(DNA methylase)

RedRaider77_33

RedRaider77_34

RedRaider77_35
(terminase)

RedRaider77_36
(portal protein)

RedRaider77_37
(capsid maturation protease)

RedRaider77_38
(scaffolding protein)

RedRaider77_39
(capsid decoration protein)

RedRaider77_40
(major capsid protein)

RedRaider77_41
(head-to-tail connector complex protein)

RedRaider77_42

RedRaider77_43

RedRaider77_44
(tail terminator)

RedRaider77_45
(major tail protein)

RedRaider77_46
(tail assembly chaperone)

RedRaider77_47
(tail assembly chaperone)

RedRaider77_48
(tape measure protein)

RedRaider77_49
(minor tail protein)

RedRaider77_50
(minor tail protein)

RedRaider77_51

RedRaider77_52

RedRaider77_53
(lysin A)

RedRaider77_54

RedRaider77_55
(lysin B)

RedRaider77_56
(holin)

RedRaider77_57

RedRaider77_58

RedRaider77_59

RedRaider77_60
(hydrolase)

RedRaider77_61
(helix-turn-helix DNA binding domain)

RedRaider77_62

RedRaider77_63

RedRaider77_64
(helix-turn-helix DNA binding domain)

RedRaider77_65
(exonuclease)

RedRaider77_66

RedRaider77_67

RedRaider77_68
(HNH endonuclease)

RedRaider77_69

RedRaider77_70

RedRaider77_71

RedRaider77_72

RedRaider77_73
(DprA-like DNA processing chain A)

RedRaider77_74

RedRaider77_75

RedRaider77_76

RedRaider77_77

RedRaider77_78

RedRaider77_79

RedRaider77_80

RedRaider77_81

RedRaider77_82

RedRaider77_83

RedRaider77_84
(O-methyltransferase)

RedRaider77_85
(methyltransferase)

RedRaider77_86
(galactosyltransferase)

RedRaider77_87

RedRaider77_88
(glycosyltransferase)

RedRaider77_89

RedRaider77_90

RedRaider77_91

RedRaider77_92
(HNH endonuclease)

RedRaider77_93
(minor tail protein)

RedRaider77_94
(minor tail protein)

RedRaider77_95

RedRaider77_96

RedRaider77_97

RedRaider77_98

RedRaider77_99

RedRaider77_100

RedRaider77_101

RedRaider77_102

RedRaider77_103

RedRaider77_104

RedRaider77_105

RedRaider77_106

RedRaider77_107

RedRaider77_108

RedRaider77_109

RedRaider77_110

RedRaider77_111

RedRaider77_112

RedRaider77_113
(glutamine amidotransferase domain)

RedRaider77_114

RedRaider77_115

Submitted Annotation in DNA Master FormatDownload
Submitted Minimal DNA Master FileDownload
Author ListDownload
Annotation Cover SheetDownload
Publication Info
Uploaded to GenBank?No
GenBank AccessionNone yet
Refseq NumberNone yet
Archiving Info
Archiving status Archived
Pitt Freezer Box# 73
Pitt Freezer Box Grid# F4
Available Files
Plaque PictureDownload
GenBank File for PhameratorDownload