Mycobacterium phage Pringar
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Detailed Information for Phage Pringar
Discovery Information
Isolation HostMycobacterium smegmatis mc²155
Found ByLinnea Forbes
Year Found2018
Location FoundBowling Green, OH USA
Finding InstitutionBowling Green State University
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?Yes
Isolation Temperature23°C
GPS Coordinates41.3829 N, 83.6455 W Map
Discovery NotesFound in dry organic matter 1 inch below the surface. Ambient temperature was 83°F.
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedApr 18, 2019
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina Sequencing
Approximate Shotgun Coverage190
Genome length (bp)64817
Character of genome ends3' Sticky Overhang
Overhang Length11 bases
Overhang SequenceGCGCGCAGCGC
GC Content63.4%
Sequencing NotesSequenced as part of a DOGEMS sample, and the sequence was matched to the phage by PCR.
Fasta file available?Yes: Download fasta file
Characterization
ClusterS
Subcluster--
Cluster Life CycleLytic
Other Cluster Members
Annotating InstitutionBowling Green State University
Annotation StatusIn GenBank
Plaque NotesSmall pinpricks less than 1mm in size that look clear but unsure
Has been Phamerated?Yes
Gene List

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Pringar_1

Pringar_2

Pringar_3

Pringar_4

Pringar_5

Pringar_6

Pringar_7

Pringar_8

Pringar_9

Pringar_10

Pringar_11

Pringar_12

Pringar_13

Pringar_14

Pringar_15

Pringar_16

Pringar_17

Pringar_18

Pringar_19

Pringar_20

Pringar_21

Pringar_22

Pringar_23
(helix-turn-helix DNA binding domain)

Pringar_24

Pringar_25

Pringar_26

Pringar_27

Pringar_28

Pringar_29

Pringar_30

Pringar_31

Pringar_32
(DNA methylase)

Pringar_33

Pringar_34

Pringar_35
(terminase)

Pringar_36
(portal protein)

Pringar_37
(capsid maturation protease)

Pringar_38
(scaffolding protein)

Pringar_39
(capsid decoration protein)

Pringar_40
(major capsid protein)

Pringar_41
(head-to-tail adaptor)

Pringar_42

Pringar_43

Pringar_44
(tail terminator)

Pringar_45
(major tail protein)

Pringar_46
(tail assembly chaperone)

Pringar_47
(tail assembly chaperone)

Pringar_48
(tape measure protein)

Pringar_49
(minor tail protein)

Pringar_50
(minor tail protein)

Pringar_51
(HNH endonuclease)

Pringar_52

Pringar_53

Pringar_54
(lysin A)

Pringar_55

Pringar_56
(lysin B)

Pringar_57
(holin)

Pringar_58

Pringar_59

Pringar_60
(hydrolase)

Pringar_61
(helix-turn-helix DNA binding domain)

Pringar_62

Pringar_63

Pringar_64

Pringar_65
(exonuclease)

Pringar_66

Pringar_67

Pringar_68
(HNH endonuclease)

Pringar_69

Pringar_70

Pringar_71

Pringar_72

Pringar_73

Pringar_74

Pringar_75

Pringar_76

Pringar_77

Pringar_78

Pringar_79

Pringar_80

Pringar_81
(O-methyltransferase)

Pringar_82
(glycosyltransferase)

Pringar_83
(glycosyltransferase)

Pringar_84

Pringar_85
(glycosyltransferase)

Pringar_86

Pringar_87

Pringar_88
(HNH endonuclease)

Pringar_89
(minor tail protein)

Pringar_90
(minor tail protein)

Pringar_91

Pringar_92

Pringar_93

Pringar_94

Pringar_95

Pringar_96

Pringar_97

Pringar_98

Pringar_99

Pringar_100

Pringar_101

Pringar_102

Pringar_103

Pringar_104

Pringar_105

Pringar_106

Pringar_107

Pringar_108
(carboxylate amine ligase)

Pringar_109
(glutamine amidotransferase domain)

Pringar_110

Submitted Annotation in DNA Master FormatDownload
Submitted Minimal DNA Master FileDownload
Author ListDownload
Annotation Cover SheetDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionMN428056
Refseq NumberNone yet
Archiving Info
Archiving status Archived
Pitt Freezer Box# 81
Pitt Freezer Box Grid# F6
Available Files
Plaque PictureDownload
EM PictureDownload
GenBank File for PhameratorDownload