Detailed Information for Phage Hoshi |
Discovery Information |
Isolation Host | Streptomyces griseus ATCC 10137 |
Found By | Samantha Rigg |
Year Found | 2017 |
Location Found | Nagaoka, Japan |
Finding Institution | University of North Texas |
Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
From enriched soil sample? | Yes |
Isolation Temperature | 30°C |
GPS Coordinates | 37.418152 N, 138.88682 E Map |
Discovery Notes | Found 3 inches below ground. The soil is moist and a bit grainy; it was found on a pathway in between farm plots of edamame in mountains. |
Naming Notes | Hoshi means star in Japanese to honor where the soil originated. |
Sequencing Information |
Sequencing Complete? | Yes |
Date Sequencing Completed | Jan 16, 2019 |
Sequencing Facility | University of North Texas |
Shotgun Sequencing Method | Illumina Sequencing |
Approximate Shotgun Coverage | 112 |
Genome length (bp) | 55728 |
Character of genome ends | 3' Sticky Overhang |
Overhang Length | 9 bases |
Overhang Sequence | CGCCCGCCT |
GC Content | 59.5% |
Fasta file available? | Yes: Download fasta file |
Characterization |
Cluster | BI |
Subcluster | BI1 |
Cluster Life Cycle | Lytic |
Other Cluster Members |
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Annotating Institution | University of North Texas |
Annotation Status | In GenBank |
Plaque Notes | The plaque diameter is 0.5mm. The plaques are very tiny, round, and clear. |
Number of Genes | 87 |
Number of tRNAs | 0 |
Number of tmRNAs | 0 |
Has been Phamerated? | Yes |
Gene List |
|
Submitted Minimal DNA Master File | Download |
Publication Info |
Uploaded to GenBank? | Yes |
GenBank Accession | MN204500 |
Refseq Number | None yet |
Archiving Info |
Archiving status |
Ignore |
Available Files |
Plaque Picture | Download |
Restriction Digest Picture | Download |
GenBank File for Phamerator | Download |