| Detailed Information for Phage IceWarrior |
| Discovery Information |
| Isolation Host | Streptomyces platensis MJ1A1 |
| Found By | Aishwarya Vuppala |
| Year Found | 2015 |
| Location Found | San Diego, CA USA |
| Finding Institution | University of California, San Diego |
| Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
| From enriched soil sample? | Unknown |
| Isolation Temperature | Not entered |
| GPS Coordinates | 32.963038 N, 117.153242 W Map |
| Discovery Notes | Soil information: About 50-100 ft away from my house in Rancho Penasquitos to the west
A lot of foliage, damp, grainy soil, contained worms
Very warm temperature
Phage dimensions:
The Capsid
-Average length: 77.889 nm
-Average Width: 66.705 nm
-Average Diagonal(length)-74.275 nm
Average Tail length: 287.042 nm
|
| Naming Notes | I named it after a nickname of mine and also it just looked like an ice warrior to me. |
| Sequencing Information |
| Sequencing Complete? | Yes |
| Date Sequencing Completed | Jan 19, 2016 |
| Sequencing Facility | Pittsburgh Bacteriophage Institute |
| Shotgun Sequencing Method | Illumina |
| Sequencer Used | Illumina MiSeq |
| Read Type | Single-end reads |
| Read Length | 150 bp |
| Approximate Shotgun Coverage | 913 |
| Genome length (bp) | 55532 |
| Character of genome ends | 3' Sticky Overhang |
| Overhang Length | 9 bases |
| Overhang Sequence | CGCCCGCCT |
| GC Content | 59.5% |
| Fasta file available? | Yes: Download fasta file |
| Characterization |
| Cluster | BI |
| Subcluster | BI1 |
| Cluster Life Cycle | Lytic |
| Other Cluster Members |
|
| Annotating Institution | University of North Texas |
| Annotation Status | In GenBank |
| Plaque Notes | Diameter: 1 mm
Clear plaques, Lytic phage
|
| Morphotype | Siphoviridae |
| Number of Genes | 86 |
| Number of tRNAs | 0 |
| Number of tmRNAs | 0 |
| Has been Phamerated? | Yes |
| Gene List |
|
| Submitted Minimal DNA Master File | Download |
| Publication Info |
| Uploaded to GenBank? | Yes |
| GenBank Accession | MK433259 |
| Refseq Number | None yet |
| Archiving Info |
| Archiving status |
Not in Pitt Archives |
| SEA Lysate Titer |
1.2×〖10〗^11 pfu/ml |
| Date of SEA Lysate Titering |
Oct 30, 2015 |
| Available Files |
| GenBank File for Phamerator | Download |