| Detailed Information for Phage Jamemuya19 |
| Discovery Information |
| Isolation Host | Gordonia rubripertincta NRRL B-16540 |
| Found By | Janelle Bachman Rodríguez |
| Year Found | 2023 |
| Location Found | Davie, FL United States |
| Finding Institution | Nova Southeastern University |
| Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
| From enriched soil sample? | No |
| Isolation Temperature | 30°C |
| GPS Coordinates | 26.0768 N, 80.24284 W Map |
| Discovery Notes | The soil sample for my phage was collected on September 24, 2023 at 8:28AM. It was dug from some dirt outside my dorm which appeared sandy and full of leaves. When collected, it was a sunny day with high humidity levels. Lastly, the area where it was found is home to many animals including raccoons, squirrels, and lizards. |
| Naming Notes | Jamemuya19 is a combination of my sister's nickname, the first name initial of the lab partner who helped me extract my phage's DNA, and my age when I discovered the phage. |
| Sequencing Information |
| Sequencing Complete? | Yes |
| Date Sequencing Completed | Jun 9, 2024 |
| Sequencing Facility | NC State Genomic Sciences Laboratory |
| Shotgun Sequencing Method | Illumina |
| Sequencer Used | Illumina MiSeq |
| Read Type | Single-end reads |
| Read Length | 150 bp |
| Approximate Shotgun Coverage | 53218 |
| Genome length (bp) | 65199 |
| Character of genome ends | Circularly Permuted |
| GC Content | 57.7% |
| Fasta file available? | Yes: Download fasta file |
| Characterization |
| Cluster | DV |
| Subcluster | -- |
| Cluster Life Cycle | Unknown |
| Other Cluster Members |
|
| Annotating Institution | Nova Southeastern University |
| Annotation Status | In GenBank |
| Plaque Notes | The phage's plaques appear to be clear and pretty small in size. It appears that they have a lytic cell cycle. |
| Number of Genes | 91 |
| Number of tRNAs | 0 |
| Number of tmRNAs | 0 |
| Has been Phamerated? | Yes |
| Gene List |
|
| Submitted Annotation in DNA Master Format | Download |
| Submitted Minimal DNA Master File | Download |
| Author List | Download |
| Annotation Cover Sheet | Download |
| Publication Info |
| Uploaded to GenBank? | Yes |
| GenBank Accession | PV940991 |
| Refseq Number | None yet |
| Archiving Info |
| Archiving status |
Archived |
| Pitt Freezer Box# |
184 |
| Pitt Freezer Box Grid# |
G4 |
| Available Files |
| Plaque Picture | Download |
| GenBank File for Phamerator | Download |
