Gordonia phage Kamaru
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Detailed Information for Phage Kamaru
Discovery Information
Isolation HostGordonia terrae 3612
Found ByRudra Kamat
Year Found2021
Location FoundColumbus, OH USA
Finding InstitutionThe Ohio State University
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?No
Isolation Temperature30°C
GPS Coordinates40.001 N, 83.024139 W Map
Discovery NotesSample taken near Olentangy River
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedJan 18, 2022
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina Sequencing
Approximate Shotgun Coverage1541
Genome length (bp)52694
Character of genome ends3' Sticky Overhang
Overhang Length10 bases
Overhang SequenceCTCGGGGCAT
GC Content63.1%
Fasta file available?Yes: Download fasta file
Characterization
ClusterDN
SubclusterDN1
Cluster Life CycleTemperate
Other Cluster Members
Annotating InstitutionThe Ohio State University
Annotation StatusIn GenBank
Plaque NotesClear plaques
Number of Genes97
Number of tRNAs0
Number of tmRNAs0
Has been Phamerated?Yes
Gene List

Click to View

Kamaru_1
(HNH endonuclease)

Kamaru_2

Kamaru_3
(terminase)

Kamaru_4
(portal protein)

Kamaru_5
(capsid maturation protease)

Kamaru_6
(scaffolding protein)

Kamaru_7
(major capsid protein)

Kamaru_8

Kamaru_9
(head-to-tail adaptor)

Kamaru_10
(head-to-tail stopper)

Kamaru_11

Kamaru_12
(tail terminator)

Kamaru_13
(major tail protein)

Kamaru_14

Kamaru_15
(tail assembly chaperone)

Kamaru_16
(tail assembly chaperone)

Kamaru_17
(lipoprotein)

Kamaru_18
(tape measure protein)

Kamaru_19
(minor tail protein)

Kamaru_20
(minor tail protein)

Kamaru_21

Kamaru_22
(lysin A L-Ala-D-Glu peptidase domain)

Kamaru_23
(lysin A glycosyl hydrolase domain)

Kamaru_24

Kamaru_25

Kamaru_26

Kamaru_27

Kamaru_28
(lysin B)

Kamaru_29
(minor tail protein)

Kamaru_30
(minor tail protein)

Kamaru_31

Kamaru_32

Kamaru_33

Kamaru_34

Kamaru_35

Kamaru_36

Kamaru_37

Kamaru_38

Kamaru_39
(helix-turn-helix DNA binding domain protein)

Kamaru_40

Kamaru_41

Kamaru_42

Kamaru_43

Kamaru_44
(tyrosine integrase)

Kamaru_45
(helix-turn-helix DNA binding domain)

Kamaru_46
(IrrE-like protein)

Kamaru_47

Kamaru_48

Kamaru_49
(immunity repressor)

Kamaru_50
(helix-turn-helix DNA binding domain)

Kamaru_51

Kamaru_52

Kamaru_53

Kamaru_54
(antirepressor)

Kamaru_55

Kamaru_56

Kamaru_57

Kamaru_58
(excise protein)

Kamaru_59

Kamaru_60

Kamaru_61

Kamaru_62

Kamaru_63
(WhiB family transcription factor)

Kamaru_64
(helix-turn-helix DNA binding domain)

Kamaru_65

Kamaru_66
(exonuclease)

Kamaru_67

Kamaru_68

Kamaru_69

Kamaru_70

Kamaru_71

Kamaru_72

Kamaru_73

Kamaru_74

Kamaru_75

Kamaru_76
(DNA methyltransferase)

Kamaru_77

Kamaru_78
(helix-turn-helix DNA binding domain)

Kamaru_79

Kamaru_80

Kamaru_81

Kamaru_82

Kamaru_83
(RepA-like replication initiator)

Kamaru_84
(RusA-like resolvase)

Kamaru_85

Kamaru_86

Kamaru_87

Kamaru_88

Kamaru_89

Kamaru_90

Kamaru_91

Kamaru_92

Kamaru_93

Kamaru_94

Kamaru_95

Kamaru_96

Kamaru_97

Submitted Minimal DNA Master FileDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionPP978784
Refseq NumberNone yet
Archiving Info
Archiving status Archived
Pitt Freezer Box# 143
Pitt Freezer Box Grid# H4
Available Files
GenBank File for PhameratorDownload