Streptomyces phage Kardashian
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Detailed Information for Phage Kardashian
Discovery Information
Isolation HostStreptomyces griseofuscus ATCC 23916
Found ByJared Moxley, Dylan Bodner
Year Found2018
Location FoundSt. Louis, MO USA
Finding InstitutionWashington University in St. Louis
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?No
Isolation Temperature30°C
GPS Coordinates38.6475 N, 90.3077 W Map
Discovery NotesThe sample was obtained from a dry, sandy soil 7 cm below the surface of a planter
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedFeb 6, 2019
Sequencing FacilityThe McDonnell Genome Institute at Washington University
Shotgun Sequencing MethodIllumina Sequencing
Approximate Shotgun Coverage227
Genome length (bp)55961
Character of genome ends3' Sticky Overhang
Overhang Length9 bases
Overhang SequenceCGCCCGCCT
GC Content59.8%
Fasta file available?Yes: Download fasta file
Characterization
ClusterBI
SubclusterBI6
Cluster Life CycleLytic
Other Cluster Members
Annotating InstitutionWashington University in St. Louis
Annotation StatusIn GenBank
Plaque NotesPhage Kardashian forms plaques with an average diameter of 2.3nm with a standard deviation of .3 and generally hazy edges.
Number of Genes83
Number of tRNAs0
Number of tmRNAs0
Has been Phamerated?Yes
Gene List

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Kardashian_1

Kardashian_2
(HNH endonuclease)

Kardashian_3

Kardashian_4
(lysin A)

Kardashian_5

Kardashian_6

Kardashian_7
(terminase)

Kardashian_8

Kardashian_9

Kardashian_10
(portal protein)

Kardashian_11

Kardashian_12
(major capsid protein)

Kardashian_13

Kardashian_14
(tail terminator)

Kardashian_15
(major tail protein)

Kardashian_16

Kardashian_17
(major tail protein)

Kardashian_18

Kardashian_19

Kardashian_20

Kardashian_21

Kardashian_22
(tape measure protein)

Kardashian_23
(minor tail protein)

Kardashian_24
(minor tail protein)

Kardashian_25

Kardashian_26
(hydrolase)

Kardashian_27

Kardashian_28
(holin)

Kardashian_29

Kardashian_30

Kardashian_31

Kardashian_32

Kardashian_33

Kardashian_34

Kardashian_35

Kardashian_36

Kardashian_37

Kardashian_38

Kardashian_39

Kardashian_40

Kardashian_41

Kardashian_42

Kardashian_43

Kardashian_44

Kardashian_45

Kardashian_46

Kardashian_47

Kardashian_48
(peptidase)

Kardashian_49

Kardashian_50

Kardashian_51

Kardashian_52

Kardashian_53

Kardashian_54

Kardashian_55

Kardashian_56

Kardashian_57

Kardashian_58
(DNA primase/polymerase)

Kardashian_59

Kardashian_60

Kardashian_61

Kardashian_62

Kardashian_63

Kardashian_64

Kardashian_65

Kardashian_66

Kardashian_67

Kardashian_68

Kardashian_69

Kardashian_70

Kardashian_71

Kardashian_72

Kardashian_73

Kardashian_74

Kardashian_75

Kardashian_76

Kardashian_77

Kardashian_78
(helicase)

Kardashian_79
(HNH endonuclease)

Kardashian_80
(VRR-Nuc domain protein)

Kardashian_81
(Cas4 family exonuclease)

Kardashian_82
(helix-turn-helix DNA-binding domain protein)

Kardashian_83

Submitted Minimal DNA Master FileDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionMN204496
Refseq NumberNone yet
Archiving Info
Archiving status Not in Pitt Archives
Available Files
Plaque PictureDownload
EM PictureDownload
GenBank File for PhameratorDownload