| Discovery Information |
| Isolation Host | Streptomyces lividans JI 1326 |
| Found By | Reagan Remmers, Eran Fann,Lily Levitzky |
| Year Found | 2023 |
| Location Found | St. Louis, MO United States |
| Finding Institution | Washington University in St. Louis |
| Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
| From enriched soil sample? | No |
| Isolation Temperature | Not entered |
| GPS Coordinates | 38.64325 N, 90.2981 W Map |
| Discovery Notes | The soil sample was collected on September 3, 2023 at 5:20 PM from Forest Park. The soil sample was relatively dry in comparison to soil from surrounding areas and contained lots of leaves and organic matter. |
| Naming Notes | Larnav is a combination of Lily's name and the name of a friend, Arnav, who helped with soil collection. |
| Sequencing Information |
| Sequencing Complete? | Yes |
| Date Sequencing Completed | Feb 23, 2024 |
| Sequencing Facility | The McDonnell Genome Institute at Washington University |
| Shotgun Sequencing Method | Illumina |
| Sequencer Used | Illumina MiSeq |
| Read Type | Single-end reads |
| Read Length | 150 bp |
| Approximate Shotgun Coverage | 160 |
| Genome length (bp) | 133080 |
| Character of genome ends | Direct Terminal Repeat |
| Direct Terminal Repeat Length | 11075 bp |
| GC Content | 50.1% |
| Fasta file available? | Yes: Download fasta file |
| Characterization |
| Cluster | BE |
| Subcluster | BE1 |
| Cluster Life Cycle | Lytic |
| Other Cluster Members |
|
| Annotating Institution | Washington University in St. Louis |
| Annotation Status | In GenBank |
| Plaque Notes | The plaques are clear with well defined edges. The sizes of the plaques are variable; some are large and some are small, but all are round and most are circular. The plaques have fairly smooth edges. |
| Number of Genes | 229 |
| Number of tRNAs | 43 |
| Number of tmRNAs | 1 |
| Has been Phamerated? | Yes |
| Gene List |
|
| Submitted Minimal DNA Master File | Download |
| Publication Info |
| Uploaded to GenBank? | Yes |
| GenBank Accession | PQ114750 |
| Refseq Number | None yet |
| Archiving Info |
| Archiving status |
Not in Pitt Archives |
| SEA Lysate Titer |
3.6.x.10^10 |
| Available Files |
| Plaque Picture | Download |
| Restriction Digest Picture | Download |
| EM Picture | Download |
| GenBank File for Phamerator | Download |
