Gordonia phage Leroy
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Detailed Information for Phage Leroy
Discovery Information
Isolation HostGordonia terrae 3612
Found ByMara Harouse
Year Found2020
Location FoundPittsburgh, PA United States
Finding InstitutionUniversity of Pittsburgh
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?No
Isolation Temperature30°C
GPS Coordinates40.442302 N, 79.964755 W Map
Discovery NotesAndres Quinones, Nicholas Zampaglione, Julianna Castle
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedJan 21, 2021
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina
Approximate Shotgun Coverage1112
Genome length (bp)53863
Character of genome ends3' Sticky Overhang
Overhang Length10 bases
Overhang SequenceCTCGGGGCAT
GC Content62.9%
Fasta file available?Yes: Download fasta file
Characterization
ClusterDN
SubclusterDN1
Cluster Life CycleTemperate
Other Cluster Members
Annotating InstitutionUniversity of Pittsburgh
Annotation StatusIn GenBank
Number of Genes103
Number of tRNAs1
Number of tmRNAs0
Has been Phamerated?Yes
Gene List

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Leroy_1
(HNH endonuclease)

Leroy_2
(terminase small subunit)

Leroy_3
(terminase large subunit)

Leroy_4
(portal protein)

Leroy_5
(MuF-like minor capsid protein)

Leroy_6
(scaffolding protein)

Leroy_7
(major capsid protein)

Leroy_8

Leroy_9
(head-to-tail adaptor)

Leroy_10
(head-to-tail stopper)

Leroy_11

Leroy_12
(tail terminator)

Leroy_13
(major tail protein)

Leroy_14

Leroy_15
(tail assembly chaperone)

Leroy_16
(tail assembly chaperone)

Leroy_17

Leroy_18
(tape measure protein)

Leroy_19
(minor tail protein)

Leroy_20
(minor tail protein)

Leroy_21

Leroy_22
(lysin A, protease C39 domain)

Leroy_23
(lysin A, glycosyl hydrolase domain)

Leroy_24
(holin)

Leroy_25

Leroy_26

Leroy_27

Leroy_28
(lysin B)

Leroy_29
(minor tail protein)

Leroy_30

Leroy_31

Leroy_32

Leroy_33

Leroy_34
(minor tail protein)

Leroy_35
(acetyltransferase)

Leroy_36

Leroy_37

Leroy_38

Leroy_39
(helix-turn-helix DNA-binding domain protein)

Leroy_40

Leroy_41

Leroy_42

Leroy_43

Leroy_44

Leroy_45

Leroy_46 — tRNA
(tRNA-Gly(ccc))

Leroy_47

Leroy_48

Leroy_49
(hydrolase)

Leroy_50
(tyrosine integrase)

Leroy_51
(helix-turn-helix DNA-binding domain protein)

Leroy_52
(helix-turn-helix DNA-binding domain protein)

Leroy_53
(immunity repressor)

Leroy_54
(Cro protein)

Leroy_55

Leroy_56

Leroy_57

Leroy_58
(antirepressor)

Leroy_59
(G-I-Y Y-I-G endonuclease)

Leroy_60

Leroy_61
(excise)

Leroy_62

Leroy_63

Leroy_64

Leroy_65

Leroy_66
(WhiB family transcription factor)

Leroy_67

Leroy_68

Leroy_69
(Cas4 family exonuclease)

Leroy_70

Leroy_71

Leroy_72

Leroy_73

Leroy_74

Leroy_75

Leroy_76

Leroy_77

Leroy_78

Leroy_79

Leroy_80

Leroy_81

Leroy_82

Leroy_83

Leroy_84

Leroy_85

Leroy_86

Leroy_87

Leroy_88
(HNH endonuclease)

Leroy_89
(RepA-like replication initiator)

Leroy_90
(RusA-like resolvase)

Leroy_91

Leroy_92

Leroy_93

Leroy_94

Leroy_95

Leroy_96

Leroy_97

Leroy_98

Leroy_99

Leroy_100

Leroy_101

Leroy_102

Leroy_103

Leroy_104
(HNH endonuclease)

Submitted Minimal DNA Master FileDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionMZ388553
Refseq NumberNone yet
Archiving Info
Archiving status Archived
Pitt Freezer Box# 125
Pitt Freezer Box Grid# F9
Available Files
Plaque PictureDownload
GenBank File for PhameratorDownload