| Detailed Information for Phage Lilbit | |
| Discovery Information | |
| Isolation Host | Mycobacterium smegmatis mc²155 |
| Found By | Kate Aberger |
| Year Found | 2014 |
| Location Found | New Haven, CT USA |
| Finding Institution | Southern Connecticut State University |
| Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
| From enriched soil sample? | Yes |
| Isolation Temperature | 42°C |
| GPS Coordinates | 41.0 N, 72.0 W Map |
| Discovery Notes | Found in 3 inches deep in very most soil in a compost pile The temperature was 64 degrees F and it rained over the weekend Lots of insects could live at the location that I found it Grass, leaves, tree brances, and dirt surround the site of discovery Discovered on 9-22-14 Ave capsid width (nm) = 69.81 +/- 3.13 Ave tail length (nm) = 283.58 +/- 7.02 |
| Naming Notes | I named this phage "Lilbit" because it creates tiny plaques with a diameter of 1 mm |
| Sequencing Information | |
| Sequencing Complete? | Yes |
| Date Sequencing Completed | Nov 7, 2017 |
| Sequencing Facility | Pittsburgh Bacteriophage Institute |
| Shotgun Sequencing Method | Illumina Sequencing |
| Approximate Shotgun Coverage | 419 |
| Genome length (bp) | 65106 |
| Character of genome ends | 3' Sticky Overhang |
| Overhang Length | 11 bases |
| Overhang Sequence | GCGCGCAGCGC |
| GC Content | 63.4% |
| Sequencing Notes | This phage was identified as being uncommon during a large DOGEMS screening run, then subsequently grown from frozen stock and sequenced. |
| Fasta file available? | Yes: Download fasta file |
| Characterization | |
| Cluster | S |
| Subcluster | -- |
| Cluster Life Cycle | Lytic |
| Other Cluster Members | |
| Annotating Institution | Unknown or unassigned |
| Annotation Status | Planless |
| Morphotype | Siphoviridae |
| Number of Genes | 112 |
| Number of tRNAs | 0 |
| Number of tmRNAs | 0 |
| Has been Phamerated? | Yes |
| Gene List |
Click to ViewLilbit_1 Lilbit_2 Lilbit_3 Lilbit_4 Lilbit_5 Lilbit_6 Lilbit_7 Lilbit_8 Lilbit_9 Lilbit_10 Lilbit_11 Lilbit_12 Lilbit_13 Lilbit_14 Lilbit_15 Lilbit_16 Lilbit_17 Lilbit_18 Lilbit_19 Lilbit_20 Lilbit_21 Lilbit_22 Lilbit_23 Lilbit_24 Lilbit_25 Lilbit_26 Lilbit_27 Lilbit_28 Lilbit_29 Lilbit_30 Lilbit_31 Lilbit_32 Lilbit_33 Lilbit_34 Lilbit_35 Lilbit_36 Lilbit_37 Lilbit_38 Lilbit_39 Lilbit_40 Lilbit_41 Lilbit_42 Lilbit_43 Lilbit_44 Lilbit_45 Lilbit_46 Lilbit_47 Lilbit_48 Lilbit_49 Lilbit_50 Lilbit_51 Lilbit_52 Lilbit_53 Lilbit_54 Lilbit_55 Lilbit_56 Lilbit_57 Lilbit_58 Lilbit_59 Lilbit_60 Lilbit_61 Lilbit_62 Lilbit_63 Lilbit_64 Lilbit_65 Lilbit_66 Lilbit_67 Lilbit_68 Lilbit_69 Lilbit_70 Lilbit_71 Lilbit_72 Lilbit_73 Lilbit_74 Lilbit_75 Lilbit_76 Lilbit_77 Lilbit_78 Lilbit_79 Lilbit_80 Lilbit_81 Lilbit_82 Lilbit_83 Lilbit_84 Lilbit_85 Lilbit_86 Lilbit_87 Lilbit_88 Lilbit_89 Lilbit_90 Lilbit_91 Lilbit_92 Lilbit_93 Lilbit_94 Lilbit_95 Lilbit_96 Lilbit_97 Lilbit_98 Lilbit_99 Lilbit_100 Lilbit_101 Lilbit_102 Lilbit_103 Lilbit_104 Lilbit_105 Lilbit_106 Lilbit_107 Lilbit_108 Lilbit_109 Lilbit_110 Lilbit_111 Lilbit_112 |
| Publication Info | |
| Uploaded to GenBank? | No |
| GenBank Accession | None yet |
| Refseq Number | None yet |
| Archiving Info | |
| Archiving status | Archived |
| SEA Designator | 2014SCSUlilbitKA |
| SEA Lysate Titer | 2.5 x 10^10 |
| Date of SEA Lysate Titering | Oct 21, 2014 |
| Pitt Freezer Box# | 10 |
| Pitt Freezer Box Grid# | B7 |
| Available Files | |
| Plaque Picture | Download |
| Restriction Digest Picture | Download |
| EM Picture | Download |
