Detailed Information for Phage LitninMcQueen |
Discovery Information |
Isolation Host | Gordonia terrae CAG3 |
Found By | Saanvi Billakanty |
Year Found | 2022 |
Location Found | Cleveland, OH United States |
Finding Institution | Case Western Reserve University |
Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
From enriched soil sample? | Yes |
Isolation Temperature | Not entered |
GPS Coordinates | 41.5239 N, 81.6089 W Map |
Discovery Notes | Originally isolated by Nevaeh Hagans. |
Sequencing Information |
Sequencing Complete? | Yes |
Date Sequencing Completed | Jan 9, 2023 |
Sequencing Facility | Pittsburgh Bacteriophage Institute |
Shotgun Sequencing Method | Illumina |
Approximate Shotgun Coverage | 1226 |
Genome length (bp) | 57292 |
Character of genome ends | 3' Sticky Overhang |
Overhang Length | 10 bases |
Overhang Sequence | CTCGGGGCAT |
GC Content | 63.0% |
Fasta file available? | Yes: Download fasta file |
Characterization |
Cluster | DN |
Subcluster | DN1 |
Cluster Life Cycle | Temperate |
Other Cluster Members |
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Annotating Institution | Case Western Reserve University |
Annotation Status | In GenBank |
Plaque Notes | completely clear, 2-3 mm in size |
Morphotype | Siphoviridae |
Number of Genes | 111 |
Number of tRNAs | 0 |
Number of tmRNAs | 0 |
Has been Phamerated? | Yes |
Gene List |
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Submitted Minimal DNA Master File | Download |
Publication Info |
Uploaded to GenBank? | Yes |
GenBank Accession | PP208924 |
Refseq Number | None yet |
Archiving Info |
Archiving status |
Archived |
Pitt Freezer Box# |
156 |
Pitt Freezer Box Grid# |
G3 |
Available Files |
EM Picture | Download |
GenBank File for Phamerator | Download |