Gordonia phage MortyNRick
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Detailed Information for Phage MortyNRick
Discovery Information
Isolation HostGordonia terrae 3612
Found ByA. Junagade, T. Ahmed, N. Adams, R. Smith
Year Found2022
Location FoundPittsburgh, PA United States
Finding InstitutionUniversity of Pittsburgh
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?No
Isolation Temperature30°C
GPS Coordinates40.454359 N, 79.943318 W Map
Discovery NotesCentre Plaza Apartments near the University of Pittsburgh sign
Naming NotesFavorite show
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedSep 5, 2023
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina
Sequencer UsedIllumina MiSeq
Read TypeSingle-end reads
Read Length150 bp
Approximate Shotgun Coverage254
Genome length (bp)53979
Character of genome ends3' Sticky Overhang
Overhang Length10 bases
Overhang SequenceCGTTAGGCAT
GC Content63.2%
Sequencing Notesat position 23923 bp ~ 40% of bases contain a G to A substitution
Fasta file available?Yes: Download fasta file
Characterization
ClusterDN
Subcluster--
Cluster Life CycleTemperate
Other Cluster Members
Annotating InstitutionUniversity of Pittsburgh
Annotation StatusQC Complete
Plaque Notesbulls-eye
medium large plaques- 3-4 mm in diameter
MorphotypeSiphoviridae
Number of Genes97
Number of tRNAs0
Number of tmRNAs0
Has been Phamerated?Yes
Gene List

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MortyNRick_1
(terminase, small subunit)

MortyNRick_2
(terminase, large subunit)

MortyNRick_3
(portal protein)

MortyNRick_4

MortyNRick_5
(scaffolding protein)

MortyNRick_6
(capsid decoration protein, LamD-like)

MortyNRick_7
(major capsid protein)

MortyNRick_8

MortyNRick_9
(head-to-tail adaptor)

MortyNRick_10
(head-to-tail stopper)

MortyNRick_11

MortyNRick_12
(tail terminator)

MortyNRick_13
(major tail protein)

MortyNRick_14
(tail assembly chaperone)

MortyNRick_15
(tail assembly chaperone)

MortyNRick_16

MortyNRick_17
(tape measure protein)

MortyNRick_18
(minor tail protein)

MortyNRick_19
(minor tail protein)

MortyNRick_20

MortyNRick_21
(lysin A, L-Ala-D-Glu peptidase domain)

MortyNRick_22
(lysin A, glycosyl hydrolase domain)

MortyNRick_23
(holin)

MortyNRick_24

MortyNRick_25

MortyNRick_26

MortyNRick_27
(lysin B)

MortyNRick_28
(minor tail protein)

MortyNRick_29

MortyNRick_30

MortyNRick_31

MortyNRick_32

MortyNRick_33

MortyNRick_34

MortyNRick_35
(antitoxin in toxin/antitoxin system, HicB-like)

MortyNRick_36
(toxin in toxin/antitoxin system, HicA-like)

MortyNRick_37

MortyNRick_38
(helix-turn-helix DNA binding domain)

MortyNRick_39
(Ro-like RNA binding protein)

MortyNRick_40

MortyNRick_41

MortyNRick_42
(dihydrofolate reductase)

MortyNRick_43
(tyrosine integrase)

MortyNRick_44

MortyNRick_45

MortyNRick_46
(metalloprotease)

MortyNRick_47
(immunity repressor)

MortyNRick_48

MortyNRick_49

MortyNRick_50

MortyNRick_51

MortyNRick_52
(antirepressor)

MortyNRick_53

MortyNRick_54

MortyNRick_55
(excise)

MortyNRick_56

MortyNRick_57

MortyNRick_58

MortyNRick_59

MortyNRick_60

MortyNRick_61

MortyNRick_62

MortyNRick_63

MortyNRick_64
(HNH endonuclease)

MortyNRick_65

MortyNRick_66

MortyNRick_67
(WhiB family transcription factor)

MortyNRick_68
(HNH endonuclease)

MortyNRick_69
(helix-turn-helix DNA binding domain)

MortyNRick_70
(HNH endonuclease)

MortyNRick_71

MortyNRick_72

MortyNRick_73

MortyNRick_74

MortyNRick_75
(helix-turn-helix DNA binding domain)

MortyNRick_76

MortyNRick_77

MortyNRick_78

MortyNRick_79

MortyNRick_80
(helix-turn-helix DNA binding domain)

MortyNRick_81

MortyNRick_82
(RusA-like resolvase)

MortyNRick_83

MortyNRick_84

MortyNRick_85

MortyNRick_86

MortyNRick_87

MortyNRick_88

MortyNRick_89

MortyNRick_90

MortyNRick_91

MortyNRick_92

MortyNRick_93
(helix-turn-helix DNA binding domain)

MortyNRick_94

MortyNRick_95

MortyNRick_96

MortyNRick_97
(HNH endonuclease)

Submitted Minimal DNA Master FileDownload
Publication Info
Uploaded to GenBank?No
GenBank AccessionNone yet
Refseq NumberNone yet
Archiving Info
Archiving status Archived
Pitt Freezer Box# 159
Pitt Freezer Box Grid# G5
Available Files
Plaque PictureDownload
GenBank File for PhameratorDownload