Detailed Information for Phage OctaviousRex |
Discovery Information |
Isolation Host | Mycobacterium smegmatis mc²155 |
Found By | Jared Whitford |
Year Found | 2016 |
Location Found | Newburgh, NY USA |
Finding Institution | Mount Saint Mary College |
Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
From enriched soil sample? | No |
Isolation Temperature | Not entered |
GPS Coordinates | 41.51 N, 74.01 W Map |
Discovery Notes | I walked around my college's campus and decided to gather samples from a two different flower beds, and i gathered a sample from under a tree. |
Naming Notes | I named my phage Octavious Rex because its a character from Spongebob and Spongebob is funny |
Sequencing Information |
Sequencing Complete? | Yes |
Date Sequencing Completed | Dec 1, 2016 |
Sequencing Facility | Pittsburgh Bacteriophage Institute |
Shotgun Sequencing Method | Illumina |
Approximate Shotgun Coverage | 3050 |
Genome length (bp) | 41880 |
Character of genome ends | 3' Sticky Overhang |
Overhang Length | 11 bases |
Overhang Sequence | CCCCATGGCAT |
GC Content | 66.6% |
Fasta file available? | Yes: Download fasta file |
Characterization |
Cluster | G |
Subcluster | G1 |
Cluster Life Cycle | Temperate |
Other Cluster Members |
|
Annotating Institution | Mount Saint Mary College |
Annotation Status | In GenBank |
Morphotype | Siphoviridae |
Number of Genes | 62 |
Number of tRNAs | 0 |
Number of tmRNAs | 0 |
Has been Phamerated? | Yes |
Gene List |
|
Submitted Annotation in DNA Master Format | Download |
Submitted Minimal DNA Master File | Download |
Author List | Download |
Annotation Cover Sheet | Download |
Publication Info |
Uploaded to GenBank? | Yes |
GenBank Accession | MH371119 |
Refseq Number | None yet |
Archiving Info |
Archiving status |
Archived |
Pitt Freezer Box# |
35 |
Pitt Freezer Box Grid# |
F2 |
Available Files |
Plaque Picture | Download |
Restriction Digest Picture | Download |
EM Picture | Download |
GenBank File for Phamerator | Download |