| Detailed Information for Phage OtterstedtS21 |
| Discovery Information |
| Isolation Host | Gordonia rubripertincta NRRL B-16540 |
| Found By | Sophia Otterstedt |
| Year Found | 2021 |
| Location Found | Albany, NY United States |
| Finding Institution | Albany College of Pharmacy and Health Sciences |
| Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
| From enriched soil sample? | Unknown |
| Isolation Temperature | 25°C |
| GPS Coordinates | 42.646943 N, 73.778489 W Map |
| Discovery Notes | This was located right near an active construction site on the Albany College of Pharmacy and Health Sciences campus.
The soil it was collected from was very dry and it was a tan color. The soil was also filled with rocks, grass, and tossed around debris due to its location. |
| Naming Notes | This name originated from my last name. I want my name to be on this project because I am proud of the work I did on this. It would also make it easy for my family to find this later! |
| Sequencing Information |
| Sequencing Complete? | Yes |
| Date Sequencing Completed | Jan 9, 2022 |
| Sequencing Facility | Pittsburgh Bacteriophage Institute |
| Shotgun Sequencing Method | Illumina Sequencing |
| Approximate Shotgun Coverage | 752 |
| Genome length (bp) | 67688 |
| Character of genome ends | Circularly Permuted |
| GC Content | 58.3% |
| Fasta file available? | Yes: Download fasta file |
| Characterization |
| Cluster | DV |
| Subcluster | -- |
| Cluster Life Cycle | Unknown |
| Other Cluster Members |
|
| Annotating Institution | Albany College of Pharmacy and Health Sciences |
| Annotation Status | In GenBank |
| Plaque Notes | The plaques are generally smaller with slight variations across the plate. Even after multiple rounds of purification and dilution, the plaques would have varying morphologies. Overall they would be uniform; however, there would occasionally be larger plaques among them. The possibility of a mutation was ruled out, though the origin is still unknown. |
| Morphotype | Siphoviridae |
| Number of Genes | 98 |
| Number of tRNAs | 0 |
| Number of tmRNAs | 0 |
| Has been Phamerated? | Yes |
| Gene List |
|
| Submitted Annotation in DNA Master Format | Download |
| Submitted Minimal DNA Master File | Download |
| Author List | Download |
| Annotation Cover Sheet | Download |
| Publication Info |
| Uploaded to GenBank? | Yes |
| GenBank Accession | OP172870 |
| Refseq Number | None yet |
| Archiving Info |
| Archiving status |
Archived |
| Pitt Freezer Box# |
136 |
| Pitt Freezer Box Grid# |
D11 |
| Available Files |
| Restriction Digest Picture | Download |
| GenBank File for Phamerator | Download |
