Microbacterium phage Pavlo
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Detailed Information for Phage Pavlo
Discovery Information
Isolation HostMicrobacterium foliorum NRRL B-24224
Found ByJosh Nemitz
Year Found2021
Location FoundWaverly, IA United States
Finding InstitutionWartburg College
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?No
Isolation Temperature30°C
GPS Coordinates42.7319 N, 92.4833 W Map
Discovery NotesDiscovered in dried river bed behind Wartburg College. Soil was dark and moist.
Naming NotesRandom name generator.
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedJan 17, 2022
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina Sequencing
Approximate Shotgun Coverage1191
Genome length (bp)63610
Character of genome endsDirect Terminal Repeat
Direct Terminal Repeat Length3354 bp
GC Content62.8%
Fasta file available?Yes: Download fasta file
Characterization
ClusterED
SubclusterED1
Cluster Life CycleLytic
Other Cluster Members
Annotating InstitutionWartburg College
Annotation StatusIn GenBank
Plaque NotesLarge clear plaques present while plating.
Number of Genes119
Number of tRNAs0
Number of tmRNAs0
Has been Phamerated?Yes
Gene List

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Pavlo_1

Pavlo_2

Pavlo_3

Pavlo_4

Pavlo_5

Pavlo_6

Pavlo_7

Pavlo_8

Pavlo_9

Pavlo_10

Pavlo_11

Pavlo_12

Pavlo_13

Pavlo_14

Pavlo_15

Pavlo_16

Pavlo_17

Pavlo_18

Pavlo_19

Pavlo_20

Pavlo_21

Pavlo_22

Pavlo_23

Pavlo_24

Pavlo_25

Pavlo_26

Pavlo_27

Pavlo_28

Pavlo_29
(NrdH-like glutaredoxin)

Pavlo_30
(MRE11 double-strand break endo/exonuclease)

Pavlo_31

Pavlo_32
(terminase)

Pavlo_33
(portal protein)

Pavlo_34
(capsid maturation protease)

Pavlo_35

Pavlo_36
(major capsid protein)

Pavlo_37

Pavlo_38

Pavlo_39

Pavlo_40
(hydrolase)

Pavlo_41
(head-to-tail stopper)

Pavlo_42

Pavlo_43
(tail terminator)

Pavlo_44
(endonuclease VII)

Pavlo_45

Pavlo_46
(major tail protein)

Pavlo_47
(major tail protein)

Pavlo_48
(tail assembly chaperone)

Pavlo_49
(tail assembly chaperone)

Pavlo_50
(tape measure protein)

Pavlo_51

Pavlo_52
(minor tail protein)

Pavlo_53

Pavlo_54

Pavlo_55

Pavlo_56
(endolysin)

Pavlo_57

Pavlo_58

Pavlo_59

Pavlo_60
(RuvC-like resolvase)

Pavlo_61

Pavlo_62

Pavlo_63

Pavlo_64

Pavlo_65
(DNA primase/polymerase)

Pavlo_66

Pavlo_67

Pavlo_68

Pavlo_69
(Cas4 family exonuclease)

Pavlo_70

Pavlo_71
(DNA polymerase III subunit)

Pavlo_72

Pavlo_73

Pavlo_74

Pavlo_75

Pavlo_76
(RNA ligase)

Pavlo_77
(polynucleotide kinase)

Pavlo_78
(DNA helicase)

Pavlo_79

Pavlo_80

Pavlo_81

Pavlo_82

Pavlo_83

Pavlo_84

Pavlo_85

Pavlo_86

Pavlo_87

Pavlo_88

Pavlo_89

Pavlo_90

Pavlo_91

Pavlo_92

Pavlo_93

Pavlo_94

Pavlo_95

Pavlo_96
(helix-turn-helix DNA binding domain protein)

Pavlo_97

Pavlo_98

Pavlo_99

Pavlo_100

Pavlo_101

Pavlo_102

Pavlo_103

Pavlo_104

Pavlo_105

Pavlo_106

Pavlo_107

Pavlo_108

Pavlo_109

Pavlo_110

Pavlo_111

Pavlo_112

Pavlo_113

Pavlo_114

Pavlo_115

Pavlo_116

Pavlo_117

Pavlo_118

Pavlo_119

Submitted Annotation in DNA Master FormatDownload
Submitted Minimal DNA Master FileDownload
Author ListDownload
Annotation Cover SheetDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionOP068333
Refseq NumberNone yet
Archiving Info
Archiving status Not in Pitt Archives
Available Files
GenBank File for PhameratorDownload