Detailed Information for Phage Pringar |
Discovery Information |
Isolation Host | Mycobacterium smegmatis mc²155 |
Found By | Linnea Forbes |
Year Found | 2018 |
Location Found | Bowling Green, OH USA |
Finding Institution | Bowling Green State University |
Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
From enriched soil sample? | Yes |
Isolation Temperature | 23°C |
GPS Coordinates | 41.3829 N, 83.6455 W Map |
Discovery Notes | Found in dry organic matter 1 inch below the surface. Ambient temperature was 83°F. |
Sequencing Information |
Sequencing Complete? | Yes |
Date Sequencing Completed | Apr 18, 2019 |
Sequencing Facility | Pittsburgh Bacteriophage Institute |
Shotgun Sequencing Method | Illumina |
Approximate Shotgun Coverage | 190 |
Genome length (bp) | 64817 |
Character of genome ends | 3' Sticky Overhang |
Overhang Length | 11 bases |
Overhang Sequence | GCGCGCAGCGC |
GC Content | 63.4% |
Sequencing Notes | Sequenced as part of a DOGEMS sample, and the sequence was matched to the phage by PCR. |
Fasta file available? | Yes: Download fasta file |
Characterization |
Cluster | S |
Subcluster | -- |
Cluster Life Cycle | Lytic |
Other Cluster Members |
|
Annotating Institution | Bowling Green State University |
Annotation Status | In GenBank |
Plaque Notes | Small pinpricks less than 1mm in size that look clear but unsure |
Number of Genes | 110 |
Number of tRNAs | 0 |
Number of tmRNAs | 0 |
Has been Phamerated? | Yes |
Gene List |
|
Submitted Annotation in DNA Master Format | Download |
Submitted Minimal DNA Master File | Download |
Author List | Download |
Annotation Cover Sheet | Download |
Publication Info |
Uploaded to GenBank? | Yes |
GenBank Accession | MN428056 |
Refseq Number | None yet |
Archiving Info |
Archiving status |
Archived |
Pitt Freezer Box# |
81 |
Pitt Freezer Box Grid# |
F6 |
Available Files |
Plaque Picture | Download |
EM Picture | Download |
GenBank File for Phamerator | Download |