Detailed Information for Phage Renaissance |
Discovery Information |
Isolation Host | Mycobacterium smegmatis mc²155 |
Found By | Erin Winrow |
Year Found | 2016 |
Location Found | Washington, DC USA |
Finding Institution | Howard University |
Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
From enriched soil sample? | Yes |
Isolation Temperature | Not entered |
GPS Coordinates | 38.920371 N, 77.018019 W Map |
Discovery Notes | Phage came from soil from the Howard University sign on 4th and Bryant street. |
Naming Notes | Renaissance is the code name for the first lady, Michelle Obama, someone who I admire very much. |
Sequencing Information |
Sequencing Complete? | Yes |
Date Sequencing Completed | Jan 17, 2017 |
Sequencing Facility | Pittsburgh Bacteriophage Institute |
Shotgun Sequencing Method | Illumina |
Genome length (bp) | 41879 |
Character of genome ends | Unknown |
Overhang Length | 11 bases |
Overhang Sequence | CCCCATGGCAT |
GC Content | 66.6% |
Fasta file available? | Yes: Download fasta file |
Characterization |
Cluster | G |
Subcluster | G1 |
Cluster Life Cycle | Temperate |
Other Cluster Members |
|
Annotating Institution | Alliance University (formerly Nyack College) |
Annotation Status | In GenBank |
Plaque Notes | The morphology of my plaque was medium sized. Renaissance yielded a consistent morphology of plaques of 1.8 mm in diameter. |
Morphotype | Siphoviridae |
Number of Genes | 62 |
Number of tRNAs | 0 |
Number of tmRNAs | 0 |
Has been Phamerated? | Yes |
Gene List |
|
Submitted Minimal DNA Master File | Download |
Publication Info |
Uploaded to GenBank? | Yes |
GenBank Accession | MK433277 |
Refseq Number | None yet |
Archiving Info |
Archiving status |
Archived |
SEA Lysate Titer |
3.9 x 10^9 PFU/mL |
Pitt Freezer Box# |
48 |
Pitt Freezer Box Grid# |
D5 |
Available Files |
Plaque Picture | Download |
GenBank File for Phamerator | Download |