Arthrobacter phage Renna12
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Detailed Information for Phage Renna12
Discovery Information
Isolation HostArthrobacter globiformis B-2979
Found ByCorinna Vigness
Year Found2021
Location FoundBismarck, ND United States
Finding InstitutionUniversity of Mary
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?Yes
Isolation TemperatureNot entered
GPS Coordinates46.730379 N, 100.752325 W Map
Discovery NotesFound right next to a fence post.
Naming NotesMy nickname
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedMar 17, 2022
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina Sequencing
Approximate Shotgun Coverage481
Genome length (bp)39179
Character of genome ends3' Sticky Overhang
Overhang Length12 bases
Overhang SequenceGAGTTGCCGGCA
GC Content66.0%
Fasta file available?Yes: Download fasta file
Characterization
ClusterAS
SubclusterAS3
Cluster Life CycleTemperate
Other Cluster Members
Annotating InstitutionUniversity of Mary
Annotation StatusIn GenBank
Plaque Notes3mm wide, clear and circular
Number of Genes72
Number of tRNAs0
Number of tmRNAs0
Has been Phamerated?Yes
Gene List

Click to View

Renna12_1

Renna12_2
(terminase small subunit)

Renna12_3
(terminase large subunit)

Renna12_4
(RNA binding protein)

Renna12_5
(portal protein)

Renna12_6
(capsid maturation protease)

Renna12_7
(major capsid protein)

Renna12_8

Renna12_9
(head-to-tail adaptor)

Renna12_10
(head-to-tail stopper)

Renna12_11

Renna12_12
(tail terminator)

Renna12_13
(major tail protein)

Renna12_14
(tail assembly chaperone)

Renna12_15
(tail assembly chaperone)

Renna12_16
(tape measure protein)

Renna12_17
(minor tail protein)

Renna12_18
(minor tail protein)

Renna12_19
(minor tail protein)

Renna12_20
(minor tail protein)

Renna12_21

Renna12_22

Renna12_23
(endolysin)

Renna12_24

Renna12_25

Renna12_26

Renna12_27

Renna12_28

Renna12_29
(HNH endonuclease)

Renna12_30
(helix-turn-helix DNA binding domain protein)

Renna12_31

Renna12_32

Renna12_33

Renna12_34

Renna12_35
(tyrosine integrase)

Renna12_36
(immunity repressor)

Renna12_37
(helix-turn-helix DNA binding domain protein)

Renna12_38
(helix-turn-helix DNA binding domain protein)

Renna12_39
(RecE-like exonuclease)

Renna12_40
(RecT-like DNA pairing protein)

Renna12_41
(DNA methyltransferase)

Renna12_42
(DNA methyltransferase)

Renna12_43
(helix-turn-helix DNA binding domain protein)

Renna12_44
(RusA-like resolvase)

Renna12_45
(helix-turn-helix DNA binding domain protein)

Renna12_46
(DNA methyltransferase)

Renna12_47

Renna12_48

Renna12_49

Renna12_50

Renna12_51

Renna12_52

Renna12_53
(deoxycytidylate deaminase)

Renna12_54
(ssDNA binding protein)

Renna12_55
(NucT-like nuclease)

Renna12_56

Renna12_57

Renna12_58

Renna12_59

Renna12_60

Renna12_61

Renna12_62

Renna12_63

Renna12_64

Renna12_65

Renna12_66

Renna12_67

Renna12_68

Renna12_69

Renna12_70

Renna12_71
(helix-turn-helix DNA binding domain protein)

Renna12_72
(HNH endonuclease)

Submitted Annotation in DNA Master FormatDownload
Submitted Minimal DNA Master FileDownload
Author ListDownload
Annotation Cover SheetDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionOP297552
Refseq NumberNone yet
Archiving Info
Archiving status Archived
Pitt Freezer Box# 136
Pitt Freezer Box Grid# C3
Available Files
GenBank File for PhameratorDownload