| Detailed Information for Phage Shrubaron |
| Discovery Information |
| Isolation Host | Microbacterium paraoxydans NWU1 |
| Found By | Rubina Tasnin, Aaron Rogers, Shreya Sharma |
| Year Found | 2024 |
| Location Found | Jones, OK USA |
| Finding Institution | University of Central Oklahoma |
| Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
| From enriched soil sample? | Yes |
| Isolation Temperature | 28°C |
| GPS Coordinates | 35.57774 N, 97.34032 W Map |
| Discovery Notes | The sample was collected from a shaded area. It was wet when collected. |
| Naming Notes | Combination of student names. |
| Sequencing Information |
| Sequencing Complete? | Yes |
| Date Sequencing Completed | Jan 10, 2025 |
| Sequencing Facility | Pittsburgh Bacteriophage Institute |
| Shotgun Sequencing Method | Illumina |
| Sequencer Used | Illumina NextSeq 1000 |
| Read Type | Single-end reads |
| Read Length | 100 bp |
| Approximate Shotgun Coverage | 442 |
| Genome length (bp) | 54190 |
| Character of genome ends | Circularly Permuted |
| GC Content | 68.8% |
| Fasta file available? | Yes: Download fasta file |
| Characterization |
| Cluster | EC |
| Subcluster | -- |
| Cluster Life Cycle | Lytic |
| Other Cluster Members |
|
| Annotating Institution | University of Central Oklahoma |
| Annotation Status | In GenBank |
| Plaque Notes | The phage forms clear plaques with diameter of around 3-6 mm. The plaques sometimes can be seen in clusters. |
| Morphotype | Siphoviridae |
| Number of Genes | 97 |
| Number of tRNAs | 0 |
| Number of tmRNAs | 0 |
| Has been Phamerated? | Yes |
| Gene List |
|
| Submitted Annotation in DNA Master Format | Download |
| Submitted Minimal DNA Master File | Download |
| Author List | Download |
| Annotation Cover Sheet | Download |
| Publication Info |
| Uploaded to GenBank? | Yes |
| GenBank Accession | PV876917 |
| Refseq Number | None yet |
| Archiving Info |
| Archiving status |
Not in Pitt Archives |
| Available Files |
| Plaque Picture | Download |
| EM Picture | Download |
| GenBank File for Phamerator | Download |
