Detailed Information for Phage Shrubaron |
Discovery Information |
Isolation Host | Microbacterium paraoxydans NWU1 |
Found By | Rubina Tasnin, Aaron Rogers, Shreya Sharma |
Year Found | 2024 |
Location Found | Jones, OK USA |
Finding Institution | University of Central Oklahoma |
Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
From enriched soil sample? | Yes |
Isolation Temperature | 28°C |
GPS Coordinates | 35.57774 N, 97.34032 W Map |
Discovery Notes | The sample was collected from a shaded area. It was wet when collected. |
Naming Notes | Combination of student names. |
Sequencing Information |
Sequencing Complete? | Yes |
Date Sequencing Completed | Jan 10, 2025 |
Sequencing Facility | Pittsburgh Bacteriophage Institute |
Shotgun Sequencing Method | Illumina |
Approximate Shotgun Coverage | 442 |
Genome length (bp) | 54190 |
Character of genome ends | Circularly Permuted |
GC Content | 68.8% |
Fasta file available? | Yes: Download fasta file |
Characterization |
Cluster | EC |
Subcluster | -- |
Cluster Life Cycle | Lytic |
Other Cluster Members |
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Annotating Institution | University of Central Oklahoma |
Annotation Status | Being Annotated (Expected completion by 5/1/2026) |
Plaque Notes | The phage forms clear plaques with diameter of around 3-6 mm. The plaques sometimes can be seen in clusters. |
Morphotype | Siphoviridae |
Number of Genes | 95 |
Number of tRNAs | 0 |
Number of tmRNAs | 0 |
Has been Phamerated? | Yes |
Gene List |
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Publication Info |
Uploaded to GenBank? | No |
GenBank Accession | None yet |
Refseq Number | None yet |
Archiving Info |
Archiving status |
Not in Pitt Archives |
Available Files |
Plaque Picture | Download |