Detailed Information for Phage Sizemore |
Discovery Information |
Isolation Host | Mycobacterium smegmatis mc²155 |
Former names | UptownCabaret |
Found By | Lukas Sizemore |
Year Found | 2022 |
Location Found | West Lafayette, IN United States |
Finding Institution | Purdue University |
Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
From enriched soil sample? | Unknown |
Isolation Temperature | 37°C |
GPS Coordinates | 40.421478 N, 86.916953 W Map |
Discovery Notes | The sample was collected near the bike racks at Purdue's ABE building. The day was overcast, and it had rained previously. The sample itself was primarily mulch. |
Naming Notes | Formerly Named after a famous club in the downtown Charlotte Area. That has a deep connection to Lukas. |
Sequencing Information |
Sequencing Complete? | Yes |
Date Sequencing Completed | Dec 13, 2022 |
Sequencing Facility | Pittsburgh Bacteriophage Institute |
Shotgun Sequencing Method | Illumina |
Approximate Shotgun Coverage | 1200 |
Genome length (bp) | 41890 |
Character of genome ends | 3' Sticky Overhang |
Overhang Length | 11 bases |
Overhang Sequence | CCCCATGGCAT |
GC Content | 66.6% |
Fasta file available? | Yes: Download fasta file |
Characterization |
Cluster | G |
Subcluster | G1 |
Cluster Life Cycle | Temperate |
Other Cluster Members |
|
Annotating Institution | Purdue University |
Annotation Status | In GenBank |
Plaque Notes | Some medium sized plaques and larger sized plaques. |
Morphotype | Siphoviridae |
Number of Genes | 64 |
Number of tRNAs | 0 |
Number of tmRNAs | 0 |
Has been Phamerated? | Yes |
Gene List |
|
Submitted Annotation in DNA Master Format | Download |
Submitted Minimal DNA Master File | Download |
Author List | Download |
Annotation Cover Sheet | Download |
Publication Info |
Uploaded to GenBank? | Yes |
GenBank Accession | PP208925 |
Refseq Number | None yet |
Archiving Info |
Archiving status |
Archived |
Pitt Freezer Box# |
157 |
Pitt Freezer Box Grid# |
E10 |
Available Files |
GenBank File for Phamerator | Download |