| Detailed Information for Phage Zhuangyuan | |
| Discovery Information | |
| Isolation Host | Arthrobacter globiformis B-2979 |
| Found By | Yilin Chen |
| Year Found | 2024 |
| Location Found | LOS ANGELES, CA United States |
| Finding Institution | University of Southern California |
| Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
| From enriched soil sample? | Yes |
| Isolation Temperature | 30°C |
| GPS Coordinates | 34.053691 N, 118.242766 W Map |
| Discovery Notes | The phage sample was extracted from the soil on the pathway near the right side of the Leavey Library at the USC Park Campus |
| Naming Notes | The name of my phage comes from my cat, Zhuangyuan, symbolizing the highest honor in the imperial examinations of ancient China. I hope this phage will provide valuable insights as we explore its potential to combat antibiotic-resistant bacteria, contributing to advancements in medicine. |
| Sequencing Information | |
| Sequencing Complete? | Yes |
| Date Sequencing Completed | Jan 6, 2025 |
| Sequencing Facility | Pittsburgh Bacteriophage Institute |
| Shotgun Sequencing Method | Illumina |
| Sequencer Used | Illumina NextSeq 1000 |
| Read Type | Single-end reads |
| Read Length | 100 bp |
| Approximate Shotgun Coverage | 5980 |
| Genome length (bp) | 40260 |
| Character of genome ends | 3' Sticky Overhang |
| Overhang Length | 12 bases |
| Overhang Sequence | GAGTTGCCGGCA |
| GC Content | 65.8% |
| Fasta file available? | Yes: Download fasta file |
| Characterization | |
| Cluster | AS |
| Subcluster | AS2 |
| Cluster Life Cycle | Temperate |
| Lysogeny Notes | Based on the webbed plate that the lysate was collected from, the phage is pretty lytic. |
| Other Cluster Members |
Click to ViewAbidatro (AS1) Basilisk (AS1) Brynnie (AS1) Chickaboom (AS1) Eesa (AS1) Galaxy (AS1) Gravel (AS1) Jamun (AS1) KendraB23 (AS1) Orcanus (AS1) Pelletreau (AS1) Ruchi (AS1) TaylorSipht (AS1) Toad24 (AS1) Vulpecula (AS1) Westrich (AS1) WileyE (AS1) Amelia (AS2) Antrice (AS2) Bedetta (AS2) Bibble12 (AS2) Colusalem (AS2) Coral (AS2) Cote (AS2) Cygnet (AS2) Daob (AS2) HannahPhantana (AS2) Jerole (AS2) Kepler (AS2) Kuleana (AS2) LittleTokyo (AS2) Lunar (AS2) Melons (AS2) OtsoOtso (AS2) Polka (AS2) Zhuangyuan (AS2) AmiCi24 (AS3) Andrew (AS3) Atlantica (AS3) Babushka (AS3) Camara (AS3) DanHam62 (AS3) Glotell (AS3) HamCheese (AS3) Juno112 (AS3) KHumphrey (AS3) Leona (AS3) PhluffyCoco (AS3) Rattail (AS3) RedFox (AS3) Renna12 (AS3) StuartMinion (AS3) |
| Annotating Institution | Stevenson University |
| Annotation Status | Being Annotated (Expected completion by 5/1/2025) |
| Morphotype | Siphoviridae |
| Number of Genes | 77 |
| Number of tRNAs | 0 |
| Number of tmRNAs | 0 |
| Has been Phamerated? | Yes |
| Gene List |
Click to ViewZhuangyuan_1 Zhuangyuan_2 Zhuangyuan_3 Zhuangyuan_4 Zhuangyuan_5 Zhuangyuan_6 Zhuangyuan_7 Zhuangyuan_8 Zhuangyuan_9 Zhuangyuan_10 Zhuangyuan_11 Zhuangyuan_12 Zhuangyuan_13 Zhuangyuan_14 Zhuangyuan_15 Zhuangyuan_16 Zhuangyuan_17 Zhuangyuan_18 Zhuangyuan_19 Zhuangyuan_20 Zhuangyuan_21 Zhuangyuan_22 Zhuangyuan_23 Zhuangyuan_24 Zhuangyuan_25 Zhuangyuan_26 Zhuangyuan_27 Zhuangyuan_28 Zhuangyuan_29 Zhuangyuan_30 Zhuangyuan_31 Zhuangyuan_32 Zhuangyuan_33 Zhuangyuan_34 Zhuangyuan_35 Zhuangyuan_36 Zhuangyuan_37 Zhuangyuan_38 Zhuangyuan_39 Zhuangyuan_40 Zhuangyuan_41 Zhuangyuan_42 Zhuangyuan_43 Zhuangyuan_44 Zhuangyuan_45 Zhuangyuan_46 Zhuangyuan_47 Zhuangyuan_48 Zhuangyuan_49 Zhuangyuan_50 Zhuangyuan_51 Zhuangyuan_52 Zhuangyuan_53 Zhuangyuan_54 Zhuangyuan_55 Zhuangyuan_56 Zhuangyuan_57 Zhuangyuan_58 Zhuangyuan_59 Zhuangyuan_60 Zhuangyuan_61 Zhuangyuan_62 Zhuangyuan_63 Zhuangyuan_64 Zhuangyuan_65 Zhuangyuan_66 Zhuangyuan_67 Zhuangyuan_68 Zhuangyuan_69 Zhuangyuan_70 Zhuangyuan_71 Zhuangyuan_72 Zhuangyuan_73 Zhuangyuan_74 Zhuangyuan_75 Zhuangyuan_76 Zhuangyuan_77 |
| Publication Info | |
| Uploaded to GenBank? | No |
| GenBank Accession | None yet |
| Refseq Number | None yet |
| Archiving Info | |
| Archiving status | Archived |
| SEA Lysate Titer | 2*10^10 pku/mL |
| Pitt Freezer Box# | 191 |
| Pitt Freezer Box Grid# | H4 |