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Gordonia phage CarolAnn
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Detailed Information for Phage CarolAnn
Discovery Information
Isolation HostGordonia terrae 3612
Found ByKaitlyn Anderson
Year Found2015
Location FoundPittsburgh, PA United States
Finding InstitutionUniversity of Pittsburgh
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?No
Isolation Temperature30°C
GPS Coordinates40.445 N, 79.954 W Map
Discovery NotesThe soil from which the sample was collected was dark brown, almost black. It had recently rained, and soil felt moist to the touch. Location of soil was in a flower bed. Weather the day of collection was sunny and 75 degrees F.
Naming NotesNamed after the discoverers Grandmother, Carol Ann.
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedJan 27, 2016
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina Sequencing
Approximate Shotgun Coverage1680
Genome length (bp)54167
Character of genome ends3' Sticky Overhang
Overhang Length10 bases
Overhang SequenceTGGCCGGTGA
GC Content66.9%
Fasta file available?Yes: Download fasta file
Characterization
ClusterCV
Subcluster--
Other Cluster Members
Plaque NotesPlaques are transparent and less than 1 mm in diameter.
MorphotypeSiphoviridae
Final annotation complete?Yes
Number of Genes80
Has been Phamerated?Yes
Gene List

Click to View

CarolAnn_1
(terminase, small subunit)

CarolAnn_2
(terminase, large subunit)

CarolAnn_3
(portal protein)

CarolAnn_4
(capsid maturation protease)

CarolAnn_5
(scaffolding protein)

CarolAnn_6
(major capsid protein)

CarolAnn_7

CarolAnn_8
(head-to-tail connector protein)

CarolAnn_9
(head-to-tail connector protein)

CarolAnn_10

CarolAnn_11
(head-to-tail connector protein)

CarolAnn_12
(head-to-tail connector protein)

CarolAnn_13
(head-to-tail connector protein)

CarolAnn_14
(major tail protein)

CarolAnn_15
(tail assembly chaperone)

CarolAnn_16
(tail assembly chaperone)

CarolAnn_17
(tape measure protein)

CarolAnn_18
(minor tail protein)

CarolAnn_19
(minor tail protein)

CarolAnn_20
(Lysin A, L-Ala-D-Glu Peptidase domain)

CarolAnn_21
(Lysin A, glycosyl hydrolase)

CarolAnn_22
(holin)

CarolAnn_23
(membrane protein)

CarolAnn_24
(membrane protein)

CarolAnn_25

CarolAnn_26
(lysin B)

CarolAnn_27

CarolAnn_28
(minor tail protein)

CarolAnn_29
(minor tail protein)

CarolAnn_30

CarolAnn_31
(minor tail protein)

CarolAnn_32

CarolAnn_33

CarolAnn_34

CarolAnn_35

CarolAnn_36

CarolAnn_37

CarolAnn_38

CarolAnn_39

CarolAnn_40
(integrase (S-int))

CarolAnn_41

CarolAnn_42

CarolAnn_43

CarolAnn_44

CarolAnn_45
(immunity repressor)

CarolAnn_46
(HTH DNA binding domain)

CarolAnn_47

CarolAnn_48
(antirepressor)

CarolAnn_49

CarolAnn_50

CarolAnn_51

CarolAnn_52

CarolAnn_53

CarolAnn_54

CarolAnn_55

CarolAnn_56

CarolAnn_57

CarolAnn_58

CarolAnn_59
(RecE exonuclease)

CarolAnn_60
(RecT ssDNA binding protein)

CarolAnn_61

CarolAnn_62

CarolAnn_63

CarolAnn_64

CarolAnn_65

CarolAnn_66

CarolAnn_67

CarolAnn_68
(Methylase)

CarolAnn_69

CarolAnn_70

CarolAnn_71

CarolAnn_72

CarolAnn_73

CarolAnn_74

CarolAnn_75

CarolAnn_76
(RuvC resolvase)

CarolAnn_77

CarolAnn_78
(HTH DNA binding protein)

CarolAnn_79

CarolAnn_80
(HNH endonuclease)

Publication Info
Uploaded to GenBank?Yes
GenBank AccessionKX557275
Refseq NumberNone yet
Available Files
Plaque PictureDownload
EM PictureDownload
Final DNAMaster FileDownload