Gordonia phage William
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Detailed Information for Phage William
Discovery Information
Isolation HostGordonia terrae 3612
Found ByParampreet Deol
Year Found2016
Location FoundPittsburgh, PA United States`
Finding InstitutionUniversity of Pittsburgh
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?Yes
Isolation TemperatureNot entered
GPS Coordinates40.443383 N, 79.955009 W Map
Discovery NotesThe soil was collected from a flower bed outside a clear, sunny day. The soil was slightly moist, and I dug about 3 inches into the ground to collect it. Afterwards, it was stored in a refrigerator for about 1 day before being processed in lab.
Naming NotesThe name for this phage comes from the location it was found. It was found outside of the William Pitt Union at the University of Pittsburgh.
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedFeb 16, 2017
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina Sequencing
Approximate Shotgun Coverage456
Genome length (bp)50678
Character of genome ends3' Sticky Overhang
Overhang Length10 bp
Overhang SequenceTCGCCGGTGA
GC Content66.5%
Sequencing NotesThere were two SNPs in this sample.

At position 23844, ~40% of the reads showed a G instead of the consensus A.
At position 24218, ~35% of the reads showed a G instead of the consensus A.
Fasta file available?Yes: Download fasta file
Characterization
ClusterCV
Subcluster--
Other Cluster Members
Plaque NotesWilliam produces clear plaques the relatively round and small, ranging from approximately 1 mm to 3 mm in length.
MorphotypeSiphoviridae
Final annotation complete?No
Has been Phamerated?Yes
Gene List
Publication Info
Uploaded to GenBank?No
GenBank AccessionNone yet
Refseq NumberNone yet
Available Files
Plaque PictureDownload
Restriction Digest PictureDownload
EM PictureDownload