| Detailed Information for Phage Atraxi |
| Discovery Information |
| Isolation Host | Microbacterium foliorum NRRL B-24224 |
| Found By | Robyn Cashins |
| Year Found | 2019 |
| Location Found | Salem, MA United States |
| Finding Institution | Salem State University |
| Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
| From enriched soil sample? | No |
| Isolation Temperature | 30°C |
| GPS Coordinates | 42.50025 N, 70.893889 W Map |
| Naming Notes | Atraxi is a Doctor Who alien that looks like a giant eyeball. Serendipidously, this is a perfect name, because the TEM indicates that this is podoviridae! |
| Sequencing Information |
| Sequencing Complete? | Yes |
| Date Sequencing Completed | Jan 14, 2020 |
| Sequencing Facility | Pittsburgh Bacteriophage Institute |
| Shotgun Sequencing Method | Illumina |
| Approximate Shotgun Coverage | 448 |
| Genome length (bp) | 53904 |
| Character of genome ends | Circularly Permuted |
| GC Content | 59.1% |
| Fasta file available? | Yes: Download fasta file |
| Characterization |
| Cluster | EK |
| Subcluster | EK2 |
| Cluster Life Cycle | Unknown |
| Other Cluster Members |
|
| Annotating Institution | Salem State University |
| Annotation Status | In GenBank |
| Plaque Notes | Cloudy, slow forming. |
| Morphotype | Podoviridae |
| Number of Genes | 53 |
| Number of tRNAs | 0 |
| Number of tmRNAs | 0 |
| Has been Phamerated? | Yes |
| Gene List |
|
| Submitted Annotation in DNA Master Format | Download |
| Submitted Minimal DNA Master File | Download |
| Author List | Download |
| Annotation Cover Sheet | Download |
| Publication Info |
| Uploaded to GenBank? | Yes |
| GenBank Accession | MW291018 |
| Refseq Number | None yet |
| Archiving Info |
| Archiving status |
Archived |
| Pitt Freezer Box# |
107 |
| Pitt Freezer Box Grid# |
E10 |
| Available Files |
| Plaque Picture | Download |
| Restriction Digest Picture | Download |
| EM Picture | Download |
| GenBank File for Phamerator | Download |
