Microbacterium phage Pharky
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Detailed Information for Phage Pharky
Discovery Information
Isolation HostMicrobacterium foliorum NRRL B-24224
Found ByAleda Jomy
Year Found2019
Location FoundPhiladelphia, PA United States of America
Finding InstitutionDrexel University
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?No
Isolation Temperature25°C
GPS Coordinates39.961111 N, 75.188056 W Map
Discovery NotesThe sample was collected from an open grassy area with trees at Drexel Park, on the Drexel University campus. The park soil was slightly damp.
Naming NotesI found the phage in the park, so my partner and I decided to replace the p in park with a ph, and then we added the -y to make it cute.
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedDec 4, 2019
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina Sequencing
Approximate Shotgun Coverage192
Genome length (bp)54442
Character of genome endsCircularly Permuted
GC Content59.7%
Fasta file available?Yes: Download fasta file
Characterization
ClusterEK
SubclusterEK2
Cluster Life CycleUnknown
Other Cluster Members
Annotating InstitutionDrexel University
Annotation StatusIn GenBank
Plaque NotesThe plaque assay had around 15-20 plaques of varying morphologies. They all seem to be clear plaques, but of varying sizes. The smaller plaques were 0.8mm and the larger ones were around 1 mm.
Has been Phamerated?Yes
Gene List
Submitted Minimal DNA Master FileDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionMT310891
Refseq NumberNone yet
Archiving Info
Archiving status Not in Pitt Archives
Available Files
Plaque PictureDownload
GenBank File for PhameratorDownload