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Microbacterium phage Atraxi
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Detailed Information for Phage Atraxi
Discovery Information
Isolation HostMicrobacterium foliorum NRRL B-24224 SEA
Found ByRobyn Cashins
Year Found2019
Location FoundSalem, MA United States
Finding InstitutionSalem State University
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?No
Isolation Temperature30°C
GPS Coordinates42.50025 N, 70.893889 W Map
Naming NotesAtraxi is a Doctor Who alien that looks like a giant eyeball. Serendipidously, this is a perfect name, because the TEM indicates that this is podoviridae!
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedJan 14, 2020
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina Sequencing
Approximate Shotgun Coverage448
Genome length (bp)53904
Character of genome endsCircularly Permuted
GC Content59.1%
Fasta file available?Yes: Download fasta file
Characterization
ClusterEK
SubclusterEK2
Cluster Life CycleUnknown
Other Cluster Members
Annotating InstitutionSalem State University
Annotation StatusBeing Annotated (Expected completion by 5/1/2020)
Plaque NotesCloudy, slow forming.
MorphotypePodoviridae
Has been Phamerated?Yes
Gene List
Publication Info
Uploaded to GenBank?No
GenBank AccessionNone yet
Refseq NumberNone yet
Archiving Info
Archiving status Not in Pitt Archives
Available Files
Plaque PictureDownload
Restriction Digest PictureDownload
EM PictureDownload