Microbacterium phage JordanFarm
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Detailed Information for Phage JordanFarm
Discovery Information
Isolation HostMicrobacterium foliorum NRRL B-24224
Found ByJennifer Jordan
Year Found2020
Location FoundTampa, FL United States of America
Finding InstitutionHillsborough Community College
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?No
Isolation Temperature30°C
GPS Coordinates27.96334 N, 82.42826 W Map
Discovery NotesJordanFarm was found in the backyard of a home in Ybor city. The phage was collected from the dirt underneath a banana tree, where domestic chicken often scratch and feed from.
Naming NotesThe name JordanFarm was chosen to commemorate the family and the farm-like qualities of the yard in which the phage was collected from.
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedDec 18, 2020
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina Sequencing
Approximate Shotgun Coverage316
Genome length (bp)54520
Character of genome endsCircularly Permuted
GC Content60.1%
Fasta file available?Yes: Download fasta file
Characterization
ClusterEK
SubclusterEK2
Cluster Life CycleUnknown
Other Cluster Members
Annotating InstitutionHillsborough Community College
Annotation StatusBeing Annotated (Expected completion by 5/1/2021)
Plaque NotesThe phage is 1mm in diameter, clear, and round. The phage appears either as small plaques that grow or as medium phages.
MorphotypePodoviridae
Has been Phamerated?Yes
Gene List
Publication Info
Uploaded to GenBank?No
GenBank AccessionNone yet
Refseq NumberNone yet
Archiving Info
Archiving status Archived
Pitt Freezer Box# 119
Pitt Freezer Box Grid# A8
Available Files
Plaque PictureDownload
Restriction Digest PictureDownload
EM PictureDownload