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Microbacterium phage Phedro
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Detailed Information for Phage Phedro
Discovery Information
Isolation HostMicrobacterium foliorum NRRL B-24224 SEA
Found ByAdopted by Medha Gupta and Gloria Zacharias
Year Found2019
Location FoundPhiladelphia, PA United States
Finding InstitutionDrexel University
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?Unknown
Isolation Temperature26°C
GPS Coordinates39.959722 N, 75.190278 W Map
Discovery NotesThe soil sample was found in a grassy area near trees in between Myers and Millenium Halls at Drexel University. The sample was collected on October 2, 2019 at 10:30 A.M. from a depth of 3 centimeters.
Naming NotesWe chose to name our phage Phedro because it is a variation of the name Pedro. Pedro is derived from the Latin word "petra" meaning rock. Since this is our first college biology lab of many more to come, we considered this phage to be our a rock or foundation in our education.
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedDec 4, 2019
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina Sequencing
Approximate Shotgun Coverage266
Genome length (bp)54442
Character of genome endsCircularly Permuted
GC Content59.7%
Fasta file available?Yes: Download fasta file
Characterization
ClusterEK
SubclusterEK2
Cluster Life CycleUnknown
Other Cluster Members
Annotating InstitutionDrexel University
Annotation StatusQC Complete
Has been Phamerated?Yes
Gene List
Submitted Minimal DNA Master FileDownload
Publication Info
Uploaded to GenBank?No
GenBank AccessionNone yet
Refseq NumberNone yet
Archiving Info
Archiving status Not in Pitt Archives
Available Files
Plaque PictureDownload
GenBank File for PhameratorDownload