Detailed Information for Phage Aziz |
Discovery Information |
Isolation Host | Mycobacterium smegmatis mc²155 |
Found By | Trevor Ruesch and Carol Stepniewski |
Year Found | 2017 |
Location Found | Spokane, WA USA |
Finding Institution | Gonzaga University |
Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
From enriched soil sample? | Yes |
Isolation Temperature | 22°C |
GPS Coordinates | 47.667416 N, 117.401525 W Map |
Discovery Notes | The isolation was enriched and was conducted at a room temperature of 22 degree C. |
Sequencing Information |
Sequencing Complete? | Yes |
Date Sequencing Completed | Jan 7, 2020 |
Sequencing Facility | Pittsburgh Bacteriophage Institute |
Shotgun Sequencing Method | Illumina |
Approximate Shotgun Coverage | 749 |
Genome length (bp) | 83412 |
Character of genome ends | 3' Sticky Overhang |
Overhang Length | 11 bases |
Overhang Sequence | ACCCCATGCAA |
GC Content | 60.7% |
Fasta file available? | Yes: Download fasta file |
Characterization |
Cluster | M |
Subcluster | M2 |
Cluster Life Cycle | Temperate |
Other Cluster Members |
|
Annotating Institution | Gonzaga University |
Annotation Status | In GenBank |
Plaque Notes | The plaques are clear and approximately 2 millimeters in diameter. |
Morphotype | Siphoviridae |
Number of Genes | 150 |
Number of tRNAs | 21 |
Number of tmRNAs | 1 |
Has been Phamerated? | Yes |
Gene List |
|
Submitted Minimal DNA Master File | Download |
Publication Info |
Uploaded to GenBank? | Yes |
GenBank Accession | MT658802 |
Refseq Number | None yet |
Published in Paper | Fitzgerald et al 2021, Microbiology Resource Announcements: Genome Sequences of Subcluster M2 Mycobacteriophages Estes and Aziz |
Archiving Info |
Archiving status |
Archived |
SEA Lysate Titer |
1.19x10^8 |
Date of SEA Lysate Titering |
Apr 26, 2017 |
Pitt Freezer Box# |
64 |
Pitt Freezer Box Grid# |
A9 |
Available Files |
Plaque Picture | Download |
GenBank File for Phamerator | Download |