Mycobacterium phage IPhane7

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Detailed Information for Phage IPhane7
Discovery Information
Isolation HostMycobacterium smegmatis mc²155
Found ByDylan Rood
Year Found2016
Location FoundWaynesville, NC USA
Finding InstitutionWestern Carolina University
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?Yes
Isolation TemperatureNot entered
GPS CoordinatesUnavailable
Discovery NotesFrom Compost
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedDec 6, 2016
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina Sequencing
Approximate Shotgun Coverage1739
Genome length (bp)81036
Character of genome ends3' Sticky Overhang
Overhang Length11 bases
Overhang SequenceACCTCCTGCAA
GC Content61.6%
Fasta file available?Available upon entering GPS coordinates
Characterization
ClusterM
SubclusterM1
Cluster Life CycleTemperate
Other Cluster Members
Annotating InstitutionWestern Carolina University
Annotation StatusIn GenBank
MorphotypeSiphoviridae
Has been Phamerated?Yes
Gene List

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IPhane7_1

IPhane7_2

IPhane7_3
(Lsr2-like DNA bridging protein)

IPhane7_4

IPhane7_5

IPhane7_6

IPhane7_7

IPhane7_8

IPhane7_9

IPhane7_10

IPhane7_11

IPhane7_12

IPhane7_13
(terminase small subunit)

IPhane7_14
(terminase large subunit)

IPhane7_15
(portal protein)

IPhane7_16
(MuF-like minor capsid protein)

IPhane7_17
(scaffolding protein)

IPhane7_18
(major capsid protein)

IPhane7_19
(head-to-tail adaptor)

IPhane7_20
(head-to-tail stopper)

IPhane7_21

IPhane7_22
(tail terminator)

IPhane7_23
(major tail protein)

IPhane7_24
(tail assembly chaperone)

IPhane7_25
(tail assembly chaperone)

IPhane7_26
(tape measure protein)

IPhane7_27
(minor tail protein)

IPhane7_28
(minor tail protein)

IPhane7_29
(minor tail protein)

IPhane7_30
(minor tail protein)

IPhane7_31
(minor tail protein)

IPhane7_32

IPhane7_33

IPhane7_34

IPhane7_35
(lysin A)

IPhane7_36

IPhane7_37
(holin)

IPhane7_38
(lysin B)

IPhane7_39
(NrdH-like glutaredoxin)

IPhane7_40

IPhane7_41

IPhane7_42

IPhane7_43

IPhane7_44

IPhane7_45

IPhane7_46

IPhane7_47
(nucleotidyltransferase)

IPhane7_48

IPhane7_49

IPhane7_50

IPhane7_51

IPhane7_52

IPhane7_53

IPhane7_54
(ERF family ssDNA binding protein)

IPhane7_55

IPhane7_56

IPhane7_57

IPhane7_58
(ClpP-like protease)

IPhane7_59

IPhane7_60

IPhane7_61

IPhane7_62

IPhane7_63

IPhane7_64

IPhane7_65

IPhane7_66

IPhane7_67
(ssDNA binding protein)

IPhane7_68

IPhane7_69
(DnaB-like dsDNA helicase)

IPhane7_70
(WhiB family transcription factor)

IPhane7_71
(holliday junction resolvase)

IPhane7_72
(WhiB family transcription factor)

IPhane7_73

IPhane7_74

IPhane7_75

IPhane7_76

IPhane7_77

IPhane7_78
(DnaQ-like DNA polymerase III subunit)

IPhane7_79

IPhane7_80

IPhane7_81
(HNH endonuclease)

IPhane7_82
(PTPc tyrosine phosphatase)

IPhane7_83

IPhane7_84

IPhane7_85

IPhane7_86

IPhane7_87

IPhane7_88
(HNH endonuclease)

IPhane7_89

IPhane7_92

IPhane7_99

IPhane7_103

IPhane7_105
(ribonucleotide reductase)

IPhane7_113
(RtcB-like RNA ligase)

IPhane7_114
(band-7-like membrane protein)

IPhane7_115
(MazG-like nucleotide pyrophosphohydrolase)

IPhane7_116

IPhane7_117

IPhane7_118

IPhane7_119

IPhane7_120

IPhane7_121

IPhane7_122
(DprA-like DNA processing chain A)

IPhane7_123

IPhane7_124
(metallophosphoesterase)

IPhane7_125

IPhane7_126

IPhane7_127

IPhane7_128

IPhane7_129
(serine integrase)

IPhane7_130

IPhane7_131

IPhane7_132

IPhane7_133

IPhane7_134

IPhane7_135

IPhane7_136

IPhane7_137

IPhane7_138

IPhane7_139

IPhane7_140

IPhane7_141

IPhane7_142

IPhane7_143

IPhane7_144

IPhane7_145

IPhane7_146

IPhane7_147

IPhane7_148

IPhane7_149

IPhane7_150

IPhane7_151

IPhane7_152

IPhane7_153

IPhane7_154

IPhane7_155

IPhane7_156

Submitted Annotation in DNA Master FormatDownload
Submitted Minimal DNA Master FileDownload
Author ListDownload
Annotation Cover SheetDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionMH697587
Refseq NumberNone yet
Archiving Info
Archiving status Archived
Pitt Freezer Box# 43
Pitt Freezer Box Grid# F9
Available Files
Plaque PictureDownload
Restriction Digest PictureDownload
EM PictureDownload
GenBank File for PhameratorDownload